RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
LINC00888-203ENST00000482098 DNMT3AQ9Y6K1 912 aaPredicted RBP10.49□□□□□ -0.73
LINC00888-203ENST00000482098 RREB1Q92766 1687 aa10.49□□□□□ -0.73
LINC00888-203ENST00000482098 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
LINC00888-203ENST00000482098 ERCC5P28715 1186 aaPredicted RBP10.48□□□□□ -0.73
LINC00888-203ENST00000482098 USP4Q13107 963 aa10.48□□□□□ -0.73
LINC00888-203ENST00000482098 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
LINC00888-203ENST00000482098 MKNK1Q9BUB5 465 aa10.48□□□□□ -0.73
LINC00888-203ENST00000482098 SEPT3Q9UH03 358 aa10.48□□□□□ -0.73
LINC00888-203ENST00000482098 PIK3C2GO75747 1445 aa10.48□□□□□ -0.73
LINC00888-203ENST00000482098 PPP4CP60510 307 aa10.47□□□□□ -0.73
LINC00888-203ENST00000482098 ARHGAP4P98171 946 aa10.47□□□□□ -0.73
LINC00888-203ENST00000482098 C14orf93Q9H972 538 aaKnown RBP10.47□□□□□ -0.73
LINC00888-203ENST00000482098 AXIN2Q9Y2T1 843 aa10.47□□□□□ -0.73
LINC00888-203ENST00000482098 THRAP3Q9Y2W1 955 aaKnown RBP10.47□□□□□ -0.73
LINC00888-203ENST00000482098 EIF3AQ14152 1382 aaKnown RBP10.47□□□□□ -0.73
LINC00888-203ENST00000482098 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
LINC00888-203ENST00000482098 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
LINC00888-203ENST00000482098 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
LINC00888-203ENST00000482098 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
LINC00888-203ENST00000482098 PMFBP1Q8TBY8 1022 aa10.46□□□□□ -0.73
LINC00888-203ENST00000482098 PCDHGA11Q9Y5H2 935 aa10.46□□□□□ -0.73
LINC00888-203ENST00000482098 DHX57Q6P158 1386 aaKnown RBP10.46□□□□□ -0.74
LINC00888-203ENST00000482098 RAB3GAP2Q9H2M9 1393 aa10.46□□□□□ -0.74
LINC00888-203ENST00000482098 SPATA31E1Q6ZUB1 1445 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 ERBB3P21860 1342 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
LINC00888-203ENST00000482098 WEE1P30291 646 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 FGD1P98174 961 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 ECM1Q16610 540 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 SYT17Q9BSW7 474 aa10.45□□□□□ -0.74
LINC00888-203ENST00000482098 KIAA0232Q92628 1395 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 M0R2N6 131 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 FAM13AO94988 1023 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 MMP16P51512 607 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 POTEEQ6S8J3 1075 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 PRAM1Q96QH2 718 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
LINC00888-203ENST00000482098 MAP3K5Q99683 1374 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 MAGEB6P1A0A0J9YX57 407 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 EVA1CP58658 441 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 MTMR3Q13615 1198 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
LINC00888-203ENST00000482098 COL26A1Q96A83 441 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 SPATA32Q96LK8 384 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 SPSB2Q99619 263 aa10.43□□□□□ -0.74
LINC00888-203ENST00000482098 TRPM3Q9HCF6 1732 aaPredicted RBP10.43□□□□□ -0.74
LINC00888-203ENST00000482098 SSH2Q76I76 1423 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 IFT172Q9UG01 1749 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 SMARCA5O60264 1052 aaPredicted RBP10.42□□□□□ -0.74
LINC00888-203ENST00000482098 LGR5O75473 907 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 APLP1P51693 650 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
LINC00888-203ENST00000482098 RGL3Q3MIN7 710 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 HELQQ8TDG4 1101 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 STRN4Q9NRL3 753 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 DLC1Q96QB1 1528 aa10.42□□□□□ -0.74
LINC00888-203ENST00000482098 NDUFB5O43674 189 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 TSEN2Q8NCE0 465 aaKnown RBP10.41□□□□□ -0.74
LINC00888-203ENST00000482098 NGDNQ8NEJ9 315 aaKnown RBP10.41□□□□□ -0.74
LINC00888-203ENST00000482098 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 RBCK1Q9BYM8 510 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
LINC00888-203ENST00000482098 MTFR1LQ9H019 292 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 POGKQ9P215 609 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
LINC00888-203ENST00000482098 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 OVOS2A0A0G2JMS6 1433 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 OVOS2A0A0J9YW53 1432 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 BCL9O00512 1426 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 OVOS2Q6IE36 1432 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 CAMTA1Q9Y6Y1 1673 aa10.41□□□□□ -0.74
LINC00888-203ENST00000482098 CPDO75976 1380 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 RGPD8O14715 1765 aaPredicted RBP10.4□□□□□ -0.74
LINC00888-203ENST00000482098 TK2O00142 265 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 AGERQ15109 404 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 CHRNA2Q15822 529 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 NBPF20Q3BBV1 942 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 BPHLQ86WA6 291 aaPredicted RBP10.4□□□□□ -0.74
LINC00888-203ENST00000482098 FAM160A2Q8N612 972 aaPredicted RBP10.4□□□□□ -0.74
LINC00888-203ENST00000482098 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 PCDHB11Q9Y5F2 797 aa10.4□□□□□ -0.74
LINC00888-203ENST00000482098 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
LINC00888-203ENST00000482098 ATP7BP35670 1465 aa10.39□□□□□ -0.75
LINC00888-203ENST00000482098 ZBTB7AO95365 584 aa10.39□□□□□ -0.75
LINC00888-203ENST00000482098 P4HBP07237 508 aaKnown RBP10.39□□□□□ -0.75
LINC00888-203ENST00000482098 MRPL58Q14197 206 aaKnown RBP10.39□□□□□ -0.75
LINC00888-203ENST00000482098 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
LINC00888-203ENST00000482098 PRR36Q9H6K5 1346 aa10.38□□□□□ -0.75
LINC00888-203ENST00000482098 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
LINC00888-203ENST00000482098 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
LINC00888-203ENST00000482098 MYCP01106 439 aaPredicted RBP10.38□□□□□ -0.75
LINC00888-203ENST00000482098 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC00888-203ENST00000482098 NAA30Q147X3 362 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms