RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 CDHR2Q9BYE9 1310 aa15.67■□□□□ 0.1
SQSTM1-207ENST00000481335 MYH3P11055 1940 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 POTEIP0CG38 1075 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 POTEJP0CG39 1038 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 MPNDQ8N594 471 aa15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-207ENST00000481335 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
SQSTM1-207ENST00000481335 ZNRF3Q9ULT6 936 aa15.65■□□□□ 0.1
SQSTM1-207ENST00000481335 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 ATP5J2-PTCD1G3V325 749 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 TCERG1O14776 1098 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 ANP32CO43423 234 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 SCNN1DP51172 638 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 AOC3Q16853 763 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 EAPPQ56P03 285 aaPredicted RBP15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 WWC1Q8IX03 1113 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 TRPM7Q96QT4 1865 aa15.64■□□□□ 0.09
SQSTM1-207ENST00000481335 IRS4O14654 1257 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-207ENST00000481335 ITGBL1O95965 494 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-207ENST00000481335 USP50Q70EL3 339 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-207ENST00000481335 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-207ENST00000481335 GJA3Q9Y6H8 435 aa15.63■□□□□ 0.09
SQSTM1-207ENST00000481335 TMEM88BA6NKF7 163 aa15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 ELL2O00472 640 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 STK31Q9BXU1 1019 aa15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 CLEC11AQ9Y240 323 aa15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 CNTNAP1P78357 1384 aa15.62■□□□□ 0.09
SQSTM1-207ENST00000481335 TNIP1Q15025 636 aa15.61■□□□□ 0.09
SQSTM1-207ENST00000481335 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
SQSTM1-207ENST00000481335 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
SQSTM1-207ENST00000481335 MYD88Q99836 296 aa15.61■□□□□ 0.09
SQSTM1-207ENST00000481335 CWC25Q9NXE8 425 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-207ENST00000481335 PDE8AO60658 829 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 CXCL9Q07325 125 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 CCDC152Q4G0S7 254 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 CIAPIN1Q6FI81 312 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 KSR2Q6VAB6 950 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 SLC51AQ86UW1 340 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 ADARB2Q9NS39 739 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 GPRC5DQ9NZD1 345 aa15.6■□□□□ 0.09
SQSTM1-207ENST00000481335 RPS8P62241 208 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 NEXNQ0ZGT2 675 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 WDR63Q8IWG1 891 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 EYA3Q99504 573 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 PSME4Q14997 1843 aa15.59■□□□□ 0.09
SQSTM1-207ENST00000481335 EPS15P42566 896 aa15.58■□□□□ 0.08
SQSTM1-207ENST00000481335 WASHC4Q2M389 1173 aa15.58■□□□□ 0.08
SQSTM1-207ENST00000481335 TSR2Q969E8 191 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-207ENST00000481335 NSFL1CQ9UNZ2 370 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-207ENST00000481335 MAP3K2Q9Y2U5 619 aa15.58■□□□□ 0.08
SQSTM1-207ENST00000481335 COL4A1P02462 1669 aa15.57■□□□□ 0.08
SQSTM1-207ENST00000481335 RTL5Q5HYW3 569 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-207ENST00000481335 MAP1SQ66K74 1059 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-207ENST00000481335 ZC3H15Q8WU90 426 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-207ENST00000481335 PI4KAP2A4QPH2 592 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 RASSF10A6NK89 507 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 HSPA1AP0DMV8 641 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 HSPA1BP0DMV9 641 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 PI4KAP1Q8N8J0 262 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 DPF2Q92785 391 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 RTL9Q8NET4 1388 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 ZNF609O15014 1411 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 THSD7BQ9C0I4 1608 aa15.56■□□□□ 0.08
SQSTM1-207ENST00000481335 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 RPS12P25398 132 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 GMPSP49915 693 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 PGAP2Q9UHJ9 254 aa15.55■□□□□ 0.08
SQSTM1-207ENST00000481335 YDJCA8MPS7 323 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 C6orf229H3BNL8 230 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 CTSWP56202 376 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 GPSM2P81274 684 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 TBC1D16Q8TBP0 767 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 ZNF428Q96B54 188 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 POLLQ9UGP5 575 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 SCN9AQ15858 1988 aa15.54■□□□□ 0.08
SQSTM1-207ENST00000481335 XDHP47989 1333 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 SPEF2Q9C093 1822 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 H7C1D1 291 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 RAD17O75943 681 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 FLIIQ13045 1269 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 ANKRD18AQ8IVF6 992 aa15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 ZC3H12CQ9C0D7 883 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-207ENST00000481335 GGA1Q9UJY5 639 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms