RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CELF1Q92879 486 aaKnown RBP25.72■■□□□ 1.71
CTSA-206ENST00000480961 RCAN3Q9UKA8 241 aa25.72■■□□□ 1.71
CTSA-206ENST00000480961 BRCA1P38398 1863 aaKnown RBP25.72■■□□□ 1.71
CTSA-206ENST00000480961 CCT4P50991 539 aaKnown RBP25.71■■□□□ 1.71
CTSA-206ENST00000480961 GRAPQ13588 217 aa25.71■■□□□ 1.71
CTSA-206ENST00000480961 CCDC152Q4G0S7 254 aa25.71■■□□□ 1.71
CTSA-206ENST00000480961 ZKSCAN2Q63HK3 967 aa25.71■■□□□ 1.71
CTSA-206ENST00000480961 TTLL11Q8NHH1 800 aa25.71■■□□□ 1.71
CTSA-206ENST00000480961 GRAPLQ8TC17 118 aaPredicted RBP25.71■■□□□ 1.71
CTSA-206ENST00000480961 DLEC1Q9Y238 1755 aa25.71■■□□□ 1.71
CTSA-206ENST00000480961 EPHA10Q5JZY3 1008 aa25.7■■□□□ 1.7
CTSA-206ENST00000480961 USP44Q9H0E7 712 aa25.7■■□□□ 1.7
CTSA-206ENST00000480961 GREM2Q9H772 168 aa25.7■■□□□ 1.7
CTSA-206ENST00000480961 SLX4Q8IY92 1834 aa25.7■■□□□ 1.7
CTSA-206ENST00000480961 DDX60Q8IY21 1712 aaKnown RBP25.69■■□□□ 1.7
CTSA-206ENST00000480961 NFKBIEO00221 500 aa25.69■■□□□ 1.7
CTSA-206ENST00000480961 FOXO4P98177 505 aa25.69■■□□□ 1.7
CTSA-206ENST00000480961 SUCLG2Q96I99 432 aa25.69■■□□□ 1.7
CTSA-206ENST00000480961 PLA2G12BQ9BX93 195 aa25.69■■□□□ 1.7
CTSA-206ENST00000480961 BBOX1O75936 387 aa25.68■■□□□ 1.7
CTSA-206ENST00000480961 CCDC93Q567U6 631 aa25.68■■□□□ 1.7
CTSA-206ENST00000480961 PRELPP51888 382 aa25.66■■□□□ 1.7
CTSA-206ENST00000480961 RPS8P62241 208 aaKnown RBP25.66■■□□□ 1.7
CTSA-206ENST00000480961 KAZALD1Q96I82 304 aa25.66■■□□□ 1.7
CTSA-206ENST00000480961 CHMP3Q9Y3E7 222 aa25.66■■□□□ 1.7
CTSA-206ENST00000480961 ATP6V0A2Q9Y487 856 aa25.66■■□□□ 1.7
CTSA-206ENST00000480961 UTYO14607 1347 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 PLIN1O60240 522 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 CSF1RP07333 972 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 FAM161AQ3B820 660 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 SOGA3Q5TF21 947 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 INTS3Q68E01 1043 aaKnown RBP25.65■■□□□ 1.7
CTSA-206ENST00000480961 LMBR1LQ6UX01 489 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 TMEM57Q8N5G2 664 aa25.65■■□□□ 1.7
CTSA-206ENST00000480961 COL4A1P02462 1669 aa25.64■■□□□ 1.7
CTSA-206ENST00000480961 C9orf131Q5VYM1 1079 aa25.64■■□□□ 1.7
CTSA-206ENST00000480961 LAMB2P55268 1798 aa25.64■■□□□ 1.69
CTSA-206ENST00000480961 RLBP1P12271 317 aa25.63■■□□□ 1.69
CTSA-206ENST00000480961 YY1P25490 414 aa25.63■■□□□ 1.69
CTSA-206ENST00000480961 SP8Q8IXZ3 490 aa25.63■■□□□ 1.69
CTSA-206ENST00000480961 RTKN2Q8IZC4 609 aa25.63■■□□□ 1.69
CTSA-206ENST00000480961 TAOK3Q9H2K8 898 aa25.63■■□□□ 1.69
CTSA-206ENST00000480961 ITGA6P23229 1130 aa25.62■■□□□ 1.69
CTSA-206ENST00000480961 FTSJ3Q8IY81 847 aaKnown RBP25.62■■□□□ 1.69
CTSA-206ENST00000480961 DZIP1LQ8IYY4 767 aaKnown RBP25.62■■□□□ 1.69
CTSA-206ENST00000480961 MEIS3Q99687 375 aa25.62■■□□□ 1.69
CTSA-206ENST00000480961 TMX4Q9H1E5 349 aaPredicted RBP25.62■■□□□ 1.69
CTSA-206ENST00000480961 BICC1Q9H694 974 aaKnown RBP25.62■■□□□ 1.69
CTSA-206ENST00000480961 ARFGEF1Q9Y6D6 1849 aa25.61■■□□□ 1.69
CTSA-206ENST00000480961 CC2D2BQ6DHV5 1058 aa25.61■■□□□ 1.69
CTSA-206ENST00000480961 ANKRD18AQ8IVF6 992 aa25.61■■□□□ 1.69
CTSA-206ENST00000480961 PANK1Q8TE04 598 aa25.61■■□□□ 1.69
CTSA-206ENST00000480961 ZNF277Q9NRM2 450 aaPredicted RBP25.61■■□□□ 1.69
CTSA-206ENST00000480961 RNF181Q9P0P0 153 aa25.61■■□□□ 1.69
CTSA-206ENST00000480961 FKBP4Q02790 459 aaKnown RBP eCLIP25.6■■□□□ 1.69
CTSA-206ENST00000480961 CDC5LQ99459 802 aaKnown RBP25.6■■□□□ 1.69
CTSA-206ENST00000480961 CACNA1SQ13698 1873 aa25.6■■□□□ 1.69
CTSA-206ENST00000480961 UBTFL1P0CB47 393 aaPredicted RBP25.59■■□□□ 1.69
CTSA-206ENST00000480961 LMNB1P20700 586 aa25.59■■□□□ 1.69
CTSA-206ENST00000480961 ANKRD44Q8N8A2 993 aa25.59■■□□□ 1.69
CTSA-206ENST00000480961 RTL9Q8NET4 1388 aa25.58■■□□□ 1.69
CTSA-206ENST00000480961 TAF1P21675 1872 aa25.57■■□□□ 1.68
CTSA-206ENST00000480961 ANKRD18BA2A2Z9 1011 aa25.57■■□□□ 1.68
CTSA-206ENST00000480961 GPSM2P81274 684 aa25.57■■□□□ 1.68
CTSA-206ENST00000480961 IFIT5Q13325 482 aaKnown RBP25.57■■□□□ 1.68
CTSA-206ENST00000480961 DPP8Q6V1X1 898 aaPredicted RBP25.57■■□□□ 1.68
CTSA-206ENST00000480961 TMC4Q7Z404 712 aa25.57■■□□□ 1.68
CTSA-206ENST00000480961 MPNDQ8N594 471 aa25.57■■□□□ 1.68
CTSA-206ENST00000480961 ZNF594Q96JF6 807 aaPredicted RBP25.57■■□□□ 1.68
CTSA-206ENST00000480961 NSFL1CQ9UNZ2 370 aaKnown RBP25.57■■□□□ 1.68
CTSA-206ENST00000480961 SNED1Q8TER0 1413 aa25.56■■□□□ 1.68
CTSA-206ENST00000480961 CCDC57Q2TAC2 916 aa25.56■■□□□ 1.68
CTSA-206ENST00000480961 ITPRIPQ8IWB1 547 aa25.56■■□□□ 1.68
CTSA-206ENST00000480961 LRRFIP2Q9Y608 721 aaKnown RBP25.56■■□□□ 1.68
CTSA-206ENST00000480961 LTBP3Q9NS15 1303 aa25.56■■□□□ 1.68
CTSA-206ENST00000480961 IGHMBP2P38935 993 aaKnown RBP25.55■■□□□ 1.68
CTSA-206ENST00000480961 PSMD1Q99460 953 aa25.55■■□□□ 1.68
CTSA-206ENST00000480961 RABL6Q3YEC7 729 aaPredicted RBP25.54■■□□□ 1.68
CTSA-206ENST00000480961 BSDC1Q9NW68 430 aaPredicted RBP25.54■■□□□ 1.68
CTSA-206ENST00000480961 GNAI3P08754 354 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 GRIPAP1Q4V328 841 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 TAF7LQ5H9L4 462 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 C20orf194Q5TEA3 1177 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 MPHOSPH8Q99549 860 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 MINPP1Q9UNW1 487 aa25.53■■□□□ 1.68
CTSA-206ENST00000480961 IARSP41252 1262 aaKnown RBP25.52■■□□□ 1.68
CTSA-206ENST00000480961 GPR101Q96P66 508 aaPredicted RBP25.52■■□□□ 1.68
CTSA-206ENST00000480961 ANKIB1Q9P2G1 1089 aa25.52■■□□□ 1.68
CTSA-206ENST00000480961 WTIPA6NIX2 430 aaPredicted RBP25.51■■□□□ 1.67
CTSA-206ENST00000480961 C6orf229H3BNL8 230 aa25.51■■□□□ 1.67
CTSA-206ENST00000480961 ZNF526Q8TF50 670 aaPredicted RBP25.51■■□□□ 1.67
CTSA-206ENST00000480961 POLLQ9UGP5 575 aa25.51■■□□□ 1.67
CTSA-206ENST00000480961 AOC3Q16853 763 aa25.5■■□□□ 1.67
CTSA-206ENST00000480961 KLHDC4Q8TBB5 520 aa25.5■■□□□ 1.67
CTSA-206ENST00000480961 RTFDC1Q9BY42 306 aaPredicted RBP25.5■■□□□ 1.67
CTSA-206ENST00000480961 COG6Q9Y2V7 657 aa25.5■■□□□ 1.67
CTSA-206ENST00000480961 PPIP5K2O43314 1243 aa25.49■■□□□ 1.67
CTSA-206ENST00000480961 MS4A1P11836 297 aa25.49■■□□□ 1.67
CTSA-206ENST00000480961 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.49■■□□□ 1.67
CTSA-206ENST00000480961 TBC1D16Q8TBP0 767 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms