RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ALDH1B1P30837 517 aa19.13■□□□□ 0.65
ABCF3-213ENST00000480539 CCT4P50991 539 aaKnown RBP19.13■□□□□ 0.65
ABCF3-213ENST00000480539 DDX46Q7L014 1031 aaKnown RBP19.13■□□□□ 0.65
ABCF3-213ENST00000480539 TAF1P21675 1872 aa19.12■□□□□ 0.65
ABCF3-213ENST00000480539 PPEF1O14829 653 aaPredicted RBP19.12■□□□□ 0.65
ABCF3-213ENST00000480539 SF3B3Q15393 1217 aaKnown RBP19.12■□□□□ 0.65
ABCF3-213ENST00000480539 CCDC152Q4G0S7 254 aa19.12■□□□□ 0.65
ABCF3-213ENST00000480539 OLFM4Q6UX06 510 aa19.12■□□□□ 0.65
ABCF3-213ENST00000480539 CRAMP1Q96RY5 1269 aa19.12■□□□□ 0.65
ABCF3-213ENST00000480539 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
ABCF3-213ENST00000480539 RASSF7Q02833 373 aa19.11■□□□□ 0.65
ABCF3-213ENST00000480539 ARHGAP27Q6ZUM4 889 aa19.11■□□□□ 0.65
ABCF3-213ENST00000480539 GRAPQ13588 217 aa19.1■□□□□ 0.65
ABCF3-213ENST00000480539 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
ABCF3-213ENST00000480539 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
ABCF3-213ENST00000480539 SUCLG2Q96I99 432 aa19.1■□□□□ 0.65
ABCF3-213ENST00000480539 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
ABCF3-213ENST00000480539 SEC31BQ9NQW1 1179 aa19.1■□□□□ 0.65
ABCF3-213ENST00000480539 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 LRRC37AA6NMS7 1700 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 UTYO14607 1347 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 FAM161AQ3B820 660 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 CELF1Q92879 486 aaKnown RBP19.09■□□□□ 0.65
ABCF3-213ENST00000480539 GREM2Q9H772 168 aa19.09■□□□□ 0.65
ABCF3-213ENST00000480539 FOXO4P98177 505 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 CCDC93Q567U6 631 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 TMEM57Q8N5G2 664 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 C7orf43Q8WVR3 580 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 USP44Q9H0E7 712 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 CHMP3Q9Y3E7 222 aa19.08■□□□□ 0.64
ABCF3-213ENST00000480539 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 NFKBIEO00221 500 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 PLIN1O60240 522 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 RLBP1P12271 317 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 INTS3Q68E01 1043 aaKnown RBP19.07■□□□□ 0.64
ABCF3-213ENST00000480539 MEIS3Q99687 375 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
ABCF3-213ENST00000480539 RTL9Q8NET4 1388 aa19.06■□□□□ 0.64
ABCF3-213ENST00000480539 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
ABCF3-213ENST00000480539 DZIP1LQ8IYY4 767 aaKnown RBP19.06■□□□□ 0.64
ABCF3-213ENST00000480539 BICC1Q9H694 974 aaKnown RBP19.06■□□□□ 0.64
ABCF3-213ENST00000480539 UBTFL1P0CB47 393 aaPredicted RBP19.05■□□□□ 0.64
ABCF3-213ENST00000480539 ITGA6P23229 1130 aa19.05■□□□□ 0.64
ABCF3-213ENST00000480539 LMBR1LQ6UX01 489 aa19.05■□□□□ 0.64
ABCF3-213ENST00000480539 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
ABCF3-213ENST00000480539 PANK1Q8TE04 598 aa19.05■□□□□ 0.64
ABCF3-213ENST00000480539 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
ABCF3-213ENST00000480539 BBOX1O75936 387 aa19.04■□□□□ 0.64
ABCF3-213ENST00000480539 CSF1RP07333 972 aa19.04■□□□□ 0.64
ABCF3-213ENST00000480539 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
ABCF3-213ENST00000480539 CHD4Q14839 1912 aa19.04■□□□□ 0.64
ABCF3-213ENST00000480539 TIAM2Q8IVF5 1701 aa19.03■□□□□ 0.64
ABCF3-213ENST00000480539 PRELPP51888 382 aa19.03■□□□□ 0.64
ABCF3-213ENST00000480539 ANKRD18AQ8IVF6 992 aa19.03■□□□□ 0.64
ABCF3-213ENST00000480539 ANKRD44Q8N8A2 993 aa19.03■□□□□ 0.64
ABCF3-213ENST00000480539 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
ABCF3-213ENST00000480539 TAOK3Q9H2K8 898 aa19.03■□□□□ 0.64
ABCF3-213ENST00000480539 DUOX1Q9NRD9 1551 aa19.02■□□□□ 0.64
ABCF3-213ENST00000480539 RPS8P62241 208 aaKnown RBP19.02■□□□□ 0.64
ABCF3-213ENST00000480539 LTBP1Q14766 1721 aa19.01■□□□□ 0.63
ABCF3-213ENST00000480539 FKBP4Q02790 459 aaKnown RBP eCLIP19.01■□□□□ 0.63
ABCF3-213ENST00000480539 TMC4Q7Z404 712 aa19.01■□□□□ 0.63
ABCF3-213ENST00000480539 SP8Q8IXZ3 490 aa19.01■□□□□ 0.63
ABCF3-213ENST00000480539 RTKN2Q8IZC4 609 aa19.01■□□□□ 0.63
ABCF3-213ENST00000480539 TMX4Q9H1E5 349 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-213ENST00000480539 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
ABCF3-213ENST00000480539 LRRFIP2Q9Y608 721 aaKnown RBP19.01■□□□□ 0.63
ABCF3-213ENST00000480539 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 ANKRD18BA2A2Z9 1011 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 GNAI3P08754 354 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 IFIT5Q13325 482 aaKnown RBP19■□□□□ 0.63
ABCF3-213ENST00000480539 RABL6Q3YEC7 729 aaPredicted RBP19■□□□□ 0.63
ABCF3-213ENST00000480539 C9orf131Q5VYM1 1079 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 GOLGA6L2Q8N9W4 650 aaPredicted RBP19■□□□□ 0.63
ABCF3-213ENST00000480539 ZNF277Q9NRM2 450 aaPredicted RBP19■□□□□ 0.63
ABCF3-213ENST00000480539 SBF1O95248 1867 aa19■□□□□ 0.63
ABCF3-213ENST00000480539 LMNB1P20700 586 aa18.99■□□□□ 0.63
ABCF3-213ENST00000480539 IGHMBP2P38935 993 aaKnown RBP18.99■□□□□ 0.63
ABCF3-213ENST00000480539 CCDC57Q2TAC2 916 aa18.99■□□□□ 0.63
ABCF3-213ENST00000480539 C20orf194Q5TEA3 1177 aa18.99■□□□□ 0.63
ABCF3-213ENST00000480539 MS4A1P11836 297 aa18.98■□□□□ 0.63
ABCF3-213ENST00000480539 GPSM2P81274 684 aa18.98■□□□□ 0.63
ABCF3-213ENST00000480539 TAF7LQ5H9L4 462 aa18.98■□□□□ 0.63
ABCF3-213ENST00000480539 DPP8Q6V1X1 898 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-213ENST00000480539 ZNF594Q96JF6 807 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-213ENST00000480539 PSMD1Q99460 953 aa18.98■□□□□ 0.63
ABCF3-213ENST00000480539 YY1P25490 414 aa18.97■□□□□ 0.63
ABCF3-213ENST00000480539 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
ABCF3-213ENST00000480539 MPNDQ8N594 471 aa18.97■□□□□ 0.63
ABCF3-213ENST00000480539 MPHOSPH8Q99549 860 aa18.97■□□□□ 0.63
ABCF3-213ENST00000480539 COG6Q9Y2V7 657 aa18.97■□□□□ 0.63
ABCF3-213ENST00000480539 CCDC88AQ3V6T2 1871 aa18.97■□□□□ 0.63
ABCF3-213ENST00000480539 A0A1B0GUL6 1792 aa18.96■□□□□ 0.63
ABCF3-213ENST00000480539 COL4A5P29400 1685 aa18.96■□□□□ 0.63
ABCF3-213ENST00000480539 MVPQ14764 893 aaKnown RBP18.96■□□□□ 0.63
ABCF3-213ENST00000480539 C1orf115Q9H7X2 142 aa18.96■□□□□ 0.63
ABCF3-213ENST00000480539 BSDC1Q9NW68 430 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms