RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 TRIM27P14373 513 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 GPTP24298 496 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 MMP14P50281 582 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 CTSWP56202 376 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 GRAPQ13588 217 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 CCDC93Q567U6 631 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
HDAC6-223ENST00000480525 BICDL1Q6ZP65 573 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 SP8Q8IXZ3 490 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-223ENST00000480525 TTLL11Q8NHH1 800 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 GRAPLQ8TC17 118 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-223ENST00000480525 NECTIN2Q92692 538 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 RPGRQ92834 1020 aaKnown RBP6.42□□□□□ -1.38
HDAC6-223ENST00000480525 CDC5LQ99459 802 aaKnown RBP6.42□□□□□ -1.38
HDAC6-223ENST00000480525 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 DUOX1Q9NRD9 1551 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 TAF1P21675 1872 aa6.42□□□□□ -1.38
HDAC6-223ENST00000480525 A0A0G2JLW4 131 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 IGSF3O75054 1194 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 CWF19L2Q2TBE0 894 aaKnown RBP6.41□□□□□ -1.38
HDAC6-223ENST00000480525 C15orf52Q6ZUT6 534 aaKnown RBP6.41□□□□□ -1.38
HDAC6-223ENST00000480525 DDX46Q7L014 1031 aaKnown RBP6.41□□□□□ -1.38
HDAC6-223ENST00000480525 SUPT20HQ8NEM7 779 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 FAM89AQ96GI7 184 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 USP44Q9H0E7 712 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 BSDC1Q9NW68 430 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-223ENST00000480525 RCAN3Q9UKA8 241 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 NOB1Q9ULX3 412 aaKnown RBP6.41□□□□□ -1.38
HDAC6-223ENST00000480525 ARAP2Q8WZ64 1704 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 WDR90Q96KV7 1748 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 SPEF2Q9C093 1822 aa6.41□□□□□ -1.38
HDAC6-223ENST00000480525 ATP5J2-PTCD1G3V325 749 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 YBX3P16989 372 aaKnown RBP eCLIP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 LMNB1P20700 586 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 FKBP4Q02790 459 aaKnown RBP eCLIP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 UBE3BQ7Z3V4 1068 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 NUTM1Q86Y26 1132 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 TMX4Q9H1E5 349 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 TAOK3Q9H2K8 898 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 C9orf78Q9NZ63 289 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 DDX19BQ9UMR2 479 aa6.4□□□□□ -1.38
HDAC6-223ENST00000480525 ZNF646O15015 1829 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-223ENST00000480525 F6X3S4 739 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 PPEF1O14829 653 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-223ENST00000480525 CIAO1O76071 339 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 CHRNA5P30532 468 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 FOXO4P98177 505 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 GPR162Q16538 588 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 DZIP1LQ8IYY4 767 aaKnown RBP6.39□□□□□ -1.39
HDAC6-223ENST00000480525 KAZALD1Q96I82 304 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 ANKRD2Q9GZV1 360 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 BCS1LQ9Y276 419 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 XDHP47989 1333 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 MED23Q9ULK4 1368 aa6.39□□□□□ -1.39
HDAC6-223ENST00000480525 MYH13Q9UKX3 1938 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 ANKRD18BA2A2Z9 1011 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 NFKBIEO00221 500 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 ZBTB7BO15156 539 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 BCAR3O75815 825 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 NBPF7P0C2Y1 421 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 UBTFL1P0CB47 393 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 HCLS1P14317 486 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 KIAA2012Q0VF49 1180 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 IFIT5Q13325 482 aaKnown RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 CCDC57Q2TAC2 916 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 C3orf67Q6ZVT6 689 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 FTSJ3Q8IY81 847 aaKnown RBP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 ZNF622Q969S3 477 aaKnown RBP eCLIP6.38□□□□□ -1.39
HDAC6-223ENST00000480525 COPRSQ9NQ92 184 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 LEMD3Q9Y2U8 911 aa6.38□□□□□ -1.39
HDAC6-223ENST00000480525 MROH5Q6ZUA9 1318 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 FZD9O00144 591 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 GNAI2P04899 355 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 ITGA6P23229 1130 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 IGHMBP2P38935 993 aaKnown RBP6.37□□□□□ -1.39
HDAC6-223ENST00000480525 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
HDAC6-223ENST00000480525 SLC4A10Q6U841 1118 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 ANKRD44Q8N8A2 993 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 L3MBTL3Q96JM7 780 aaPredicted RBP6.37□□□□□ -1.39
HDAC6-223ENST00000480525 EYA3Q99504 573 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 BCL2L13Q9BXK5 485 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 SCN9AQ15858 1988 aa6.37□□□□□ -1.39
HDAC6-223ENST00000480525 ECM29Q5VYK3 1845 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 ADAMTSL1Q8N6G6 1762 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 COL4A1P02462 1669 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 PDS5AQ29RF7 1337 aaKnown RBP6.36□□□□□ -1.39
HDAC6-223ENST00000480525 IRS2Q9Y4H2 1338 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 TCERG1O14776 1098 aaKnown RBP6.36□□□□□ -1.39
HDAC6-223ENST00000480525 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 IARSP41252 1262 aaKnown RBP6.36□□□□□ -1.39
HDAC6-223ENST00000480525 FKBP1AP62942 108 aaKnown RBP6.36□□□□□ -1.39
HDAC6-223ENST00000480525 UBE4AQ14139 1066 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 FAM161AQ3B820 660 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 TMED8Q6PL24 325 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-223ENST00000480525 LMBR1LQ6UX01 489 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 PODNQ7Z5L7 613 aa6.36□□□□□ -1.39
HDAC6-223ENST00000480525 RPAP2Q8IXW5 612 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms