RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MRS2Q9HD23 443 aa18.5■□□□□ 0.55
ATG4B-218ENST00000479554 LRRC37AA6NMS7 1700 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 LMOD1P29536 600 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-218ENST00000479554 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-218ENST00000479554 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 TMC4Q7Z404 712 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 MPNDQ8N594 471 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
ATG4B-218ENST00000479554 RTFDC1Q9BY42 306 aaPredicted RBP18.49■□□□□ 0.55
ATG4B-218ENST00000479554 CLEC11AQ9Y240 323 aa18.49■□□□□ 0.55
ATG4B-218ENST00000479554 TAF1P21675 1872 aa18.48■□□□□ 0.55
ATG4B-218ENST00000479554 DDX58O95786 925 aaKnown RBP18.48■□□□□ 0.55
ATG4B-218ENST00000479554 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
ATG4B-218ENST00000479554 MYD88Q99836 296 aa18.48■□□□□ 0.55
ATG4B-218ENST00000479554 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
ATG4B-218ENST00000479554 LTBP1Q14766 1721 aa18.47■□□□□ 0.55
ATG4B-218ENST00000479554 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-218ENST00000479554 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
ATG4B-218ENST00000479554 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
ATG4B-218ENST00000479554 PASKQ96RG2 1323 aa18.47■□□□□ 0.55
ATG4B-218ENST00000479554 SCNN1DP51172 638 aa18.46■□□□□ 0.55
ATG4B-218ENST00000479554 ZBTB38Q8NAP3 1195 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-218ENST00000479554 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
ATG4B-218ENST00000479554 DUOX1Q9NRD9 1551 aa18.46■□□□□ 0.55
ATG4B-218ENST00000479554 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
ATG4B-218ENST00000479554 KIAA2012Q0VF49 1180 aa18.45■□□□□ 0.54
ATG4B-218ENST00000479554 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
ATG4B-218ENST00000479554 CELF1Q92879 486 aaKnown RBP18.45■□□□□ 0.54
ATG4B-218ENST00000479554 STK31Q9BXU1 1019 aa18.45■□□□□ 0.54
ATG4B-218ENST00000479554 MAP1SQ66K74 1059 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-218ENST00000479554 CWC25Q9NXE8 425 aaPredicted RBP18.44■□□□□ 0.54
ATG4B-218ENST00000479554 IL16Q14005 1332 aa18.44■□□□□ 0.54
ATG4B-218ENST00000479554 ITGBL1O95965 494 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-218ENST00000479554 EPS15P42566 896 aa18.43■□□□□ 0.54
ATG4B-218ENST00000479554 CXCL9Q07325 125 aa18.43■□□□□ 0.54
ATG4B-218ENST00000479554 TWISTNBQ3B726 338 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-218ENST00000479554 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
ATG4B-218ENST00000479554 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
ATG4B-218ENST00000479554 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-218ENST00000479554 COL4A1P02462 1669 aa18.43■□□□□ 0.54
ATG4B-218ENST00000479554 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
ATG4B-218ENST00000479554 CNTROBQ8N137 903 aa18.42■□□□□ 0.54
ATG4B-218ENST00000479554 MKRN1Q9UHC7 482 aaKnown RBP18.42■□□□□ 0.54
ATG4B-218ENST00000479554 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
ATG4B-218ENST00000479554 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
ATG4B-218ENST00000479554 TMEM88BA6NKF7 163 aa18.41■□□□□ 0.54
ATG4B-218ENST00000479554 CIAPIN1Q6FI81 312 aa18.41■□□□□ 0.54
ATG4B-218ENST00000479554 USP50Q70EL3 339 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-218ENST00000479554 GPRC5DQ9NZD1 345 aa18.41■□□□□ 0.54
ATG4B-218ENST00000479554 CNTNAP1P78357 1384 aa18.41■□□□□ 0.54
ATG4B-218ENST00000479554 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 PDE8AO60658 829 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 RAD17O75943 681 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 GMPSP49915 693 aaPredicted RBP18.4■□□□□ 0.54
ATG4B-218ENST00000479554 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
ATG4B-218ENST00000479554 CCDC152Q4G0S7 254 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 KSR2Q6VAB6 950 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
ATG4B-218ENST00000479554 ADARB2Q9NS39 739 aaKnown RBP18.4■□□□□ 0.54
ATG4B-218ENST00000479554 C6orf229H3BNL8 230 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 HSPA1AP0DMV8 641 aaKnown RBP18.39■□□□□ 0.53
ATG4B-218ENST00000479554 HSPA1BP0DMV9 641 aaKnown RBP18.39■□□□□ 0.53
ATG4B-218ENST00000479554 GPSM2P81274 684 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 NEXNQ0ZGT2 675 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 TNIP1Q15025 636 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 WASHC4Q2M389 1173 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 MIER1Q8N108 512 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-218ENST00000479554 SALL2Q9Y467 1007 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-218ENST00000479554 CDHR2Q9BYE9 1310 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
ATG4B-218ENST00000479554 EYA3Q99504 573 aa18.38■□□□□ 0.53
ATG4B-218ENST00000479554 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
ATG4B-218ENST00000479554 SEC31BQ9NQW1 1179 aa18.38■□□□□ 0.53
ATG4B-218ENST00000479554 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 RIMBP2O15034 1052 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 SLC4A2P04920 1241 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 WDR63Q8IWG1 891 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-218ENST00000479554 POLLQ9UGP5 575 aa18.37■□□□□ 0.53
ATG4B-218ENST00000479554 G2E3Q7L622 706 aa18.36■□□□□ 0.53
ATG4B-218ENST00000479554 DBNDD1Q9H9R9 158 aa18.36■□□□□ 0.53
ATG4B-218ENST00000479554 CTSWP56202 376 aa18.35■□□□□ 0.53
ATG4B-218ENST00000479554 CWF19L2Q2TBE0 894 aaKnown RBP18.35■□□□□ 0.53
ATG4B-218ENST00000479554 TBC1D16Q8TBP0 767 aa18.35■□□□□ 0.53
ATG4B-218ENST00000479554 PODXL2Q9NZ53 605 aa18.35■□□□□ 0.53
ATG4B-218ENST00000479554 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
ATG4B-218ENST00000479554 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 ECE2O60344 883 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 UFL1O94874 794 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 FLIIQ13045 1269 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
ATG4B-218ENST00000479554 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-218ENST00000479554 MYH3P11055 1940 aa18.33■□□□□ 0.53
ATG4B-218ENST00000479554 VEGFBP49765 207 aa18.33■□□□□ 0.52
ATG4B-218ENST00000479554 FKBP5Q13451 457 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-218ENST00000479554 DOK7Q18PE1 504 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms