RNA–Protein interactions for RNA: ENST00000478954.1

STRADBP1-201, Transcript of STE20-related kinase adaptor beta pseudogene 1, humanhuman

BASIC

Gene STRADBP1, Length 1,281 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBP1-201ENST00000478954 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 FAM177A1Q8N128 213 aaPredicted RBP8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 QTRT2Q9H974 415 aaKnown RBP8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
STRADBP1-201ENST00000478954 A0A1W2PNR3 127 aa8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 HSH2DQ96JZ2 352 aa8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 PUS7Q96PZ0 661 aaKnown RBP8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 ERICH3Q5RHP9 1530 aa8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 ZCCHC11Q5TAX3 1644 aaKnown RBP8.57□□□□□ -1.04
STRADBP1-201ENST00000478954 MPSTP25325 297 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 KRT76Q01546 638 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 ARSJQ5FYB0 599 aaPredicted RBP8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 SV2AQ7L0J3 742 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 RHPN1Q8TCX5 695 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 SAP130Q9H0E3 1048 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 UHRF1BP1LA0JNW5 1464 aa8.56□□□□□ -1.04
STRADBP1-201ENST00000478954 ARAP3Q8WWN8 1544 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 H7C1W4 665 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 WIPF1O43516 503 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 FAM13AO94988 1023 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 GMPRP36959 345 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 GAS6Q14393 721 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 ZNF280CQ8ND82 737 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 IRF7Q92985 503 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 LRFN2Q9ULH4 789 aa8.55□□□□□ -1.04
STRADBP1-201ENST00000478954 PTPRTO14522 1441 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 KDM5BQ9UGL1 1544 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 UBAP1LF5GYI3 381 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 TREHO43280 583 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 HSPA1LP34931 641 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 HDLBPQ00341 1268 aaKnown RBP8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 FMR1Q06787 632 aaKnown RBP eCLIP8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 C9orf131Q5VYM1 1079 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 LRRC69Q6ZNQ3 347 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 RNF19AQ9NV58 838 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 TTBK1Q5TCY1 1321 aaPredicted RBP8.54□□□□□ -1.04
STRADBP1-201ENST00000478954 SETD1BQ9UPS6 1966 aaKnown RBP8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 EFHC2Q5JST6 749 aa8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 GMCL1Q96IK5 515 aa8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 NDFIP2Q9NV92 336 aa8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 KLK14Q9P0G3 267 aa8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 BCS1LQ9Y276 419 aa8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 ARID4BQ4LE39 1312 aaPredicted RBP8.53□□□□□ -1.04
STRADBP1-201ENST00000478954 SIGLEC1Q9BZZ2 1709 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 BNIP3LO60238 219 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 IGHA2P01877 340 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 ERCC5P28715 1186 aaPredicted RBP8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 DSC3Q14574 896 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 LBRQ14739 615 aaKnown RBP8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 RTN1Q16799 776 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 COX20Q5RI15 118 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 VTI1AQ96AJ9 217 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 ABHD17AQ96GS6 310 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 FAM161BQ96MY7 647 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 CCDC87Q9NVE4 849 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
STRADBP1-201ENST00000478954 DCDC2BA2VCK2 349 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 FZD6O60353 706 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 HSP90B1P14625 803 aaKnown RBP8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 DGKZQ13574 1117 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 MYO19Q96H55 970 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 RGS17Q9UGC6 210 aaPredicted RBP8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 TTC37Q6PGP7 1564 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 SETD1AO15047 1707 aaKnown RBP8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 WDR7Q9Y4E6 1490 aa8.51□□□□□ -1.05
STRADBP1-201ENST00000478954 TNFRSF10BO14763 440 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 SCAMP3O14828 347 aaKnown RBP8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 NDUFB5O43674 189 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 EIF1AXP47813 144 aaKnown RBP8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 RAD51AP2Q09MP3 1159 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 C16orf46Q6P387 395 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 UACAQ9BZF9 1416 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 PPP1R1BQ9UD71 204 aaPredicted RBP8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
STRADBP1-201ENST00000478954 TNIKQ9UKE5 1360 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 FRMPD1Q5SYB0 1578 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 ATXN7O15265 892 aaPredicted RBP8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 STRN4Q9NRL3 753 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 PARP2Q9UGN5 583 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 WWC3Q9ULE0 1092 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 GJA3Q9Y6H8 435 aa8.49□□□□□ -1.05
STRADBP1-201ENST00000478954 EFSO43281 561 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms