RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 SUPT20HQ8NEM7 779 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 LINS1Q8NG48 757 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 JDP2Q8WYK2 163 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 CDCA7LQ96GN5 454 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 RRAGCQ9HB90 399 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 SBF1O95248 1867 aa21.6■■□□□ 1.05
CDKN1A-207ENST00000478800 DPP8Q6V1X1 898 aaPredicted RBP21.59■■□□□ 1.05
CDKN1A-207ENST00000478800 CDHR2Q9BYE9 1310 aa21.58■■□□□ 1.05
CDKN1A-207ENST00000478800 MPNDQ8N594 471 aa21.58■■□□□ 1.05
CDKN1A-207ENST00000478800 GCKRQ14397 625 aa21.57■■□□□ 1.04
CDKN1A-207ENST00000478800 UBE3BQ7Z3V4 1068 aa21.57■■□□□ 1.04
CDKN1A-207ENST00000478800 LARGE2Q8N3Y3 721 aa21.57■■□□□ 1.04
CDKN1A-207ENST00000478800 F6X3S4 739 aa21.56■■□□□ 1.04
CDKN1A-207ENST00000478800 VEGFAP15692 232 aaPredicted RBP21.56■■□□□ 1.04
CDKN1A-207ENST00000478800 RPS8P62241 208 aaKnown RBP21.56■■□□□ 1.04
CDKN1A-207ENST00000478800 CELF1Q92879 486 aaKnown RBP21.56■■□□□ 1.04
CDKN1A-207ENST00000478800 CCDC85AQ96PX6 553 aaPredicted RBP21.56■■□□□ 1.04
CDKN1A-207ENST00000478800 H7C1W4 665 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 PPIP5K2O43314 1243 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 TOMM70O94826 608 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 CTSWP56202 376 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 SLC4A10Q6U841 1118 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 VPS33BQ9H267 617 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 TIAM2Q8IVF5 1701 aa21.55■■□□□ 1.04
CDKN1A-207ENST00000478800 DDNO94850 711 aaPredicted RBP21.54■■□□□ 1.04
CDKN1A-207ENST00000478800 EIF6P56537 245 aaKnown RBP21.54■■□□□ 1.04
CDKN1A-207ENST00000478800 SLC51AQ86UW1 340 aa21.54■■□□□ 1.04
CDKN1A-207ENST00000478800 NIM1KQ8IY84 436 aa21.54■■□□□ 1.04
CDKN1A-207ENST00000478800 SNED1Q8TER0 1413 aa21.54■■□□□ 1.04
CDKN1A-207ENST00000478800 DDX60Q8IY21 1712 aaKnown RBP21.53■■□□□ 1.04
CDKN1A-207ENST00000478800 ANKRD18AQ8IVF6 992 aa21.53■■□□□ 1.04
CDKN1A-207ENST00000478800 MRPL50Q8N5N7 158 aaKnown RBP21.53■■□□□ 1.04
CDKN1A-207ENST00000478800 SEC31BQ9NQW1 1179 aa21.53■■□□□ 1.04
CDKN1A-207ENST00000478800 NSFL1CQ9UNZ2 370 aaKnown RBP21.53■■□□□ 1.04
CDKN1A-207ENST00000478800 LAMB2P55268 1798 aa21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 AOC3Q16853 763 aa21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 BEND3Q5T5X7 828 aa21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 TRMT2AQ8IZ69 625 aaKnown RBP21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 CDC5LQ99459 802 aaKnown RBP21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 RTFDC1Q9BY42 306 aaPredicted RBP21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
CDKN1A-207ENST00000478800 CACNA1FO60840 1977 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 ALDH1L2Q3SY69 923 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 SSH1Q8WYL5 1049 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 BCL2L13Q9BXK5 485 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 SRCIN1Q9C0H9 1055 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 CCDC88AQ3V6T2 1871 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 PTPRCP08575 1304 aa21.51■■□□□ 1.03
CDKN1A-207ENST00000478800 C6orf229H3BNL8 230 aa21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 FZD9O00144 591 aa21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 TTLL11Q8NHH1 800 aa21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 RBM46Q8TBY0 533 aaKnown RBP21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 C9orf78Q9NZ63 289 aaPredicted RBP21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 ZNF541Q9H0D2 1346 aa21.5■■□□□ 1.03
CDKN1A-207ENST00000478800 IQCA1LA6NCM1 817 aa21.49■■□□□ 1.03
CDKN1A-207ENST00000478800 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
CDKN1A-207ENST00000478800 HSPA6P17066 643 aa21.49■■□□□ 1.03
CDKN1A-207ENST00000478800 ANKIB1Q9P2G1 1089 aa21.49■■□□□ 1.03
CDKN1A-207ENST00000478800 GPSM2P81274 684 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 GPC2Q8N158 579 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 EYA3Q99504 573 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 PLA2G12BQ9BX93 195 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 GREM2Q9H772 168 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 GJA3Q9Y6H8 435 aa21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 DICER1Q9UPY3 1922 aaKnown RBP21.48■■□□□ 1.03
CDKN1A-207ENST00000478800 GRM8O00222 908 aa21.47■■□□□ 1.03
CDKN1A-207ENST00000478800 IGHMBP2P38935 993 aaKnown RBP21.47■■□□□ 1.03
CDKN1A-207ENST00000478800 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
CDKN1A-207ENST00000478800 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
CDKN1A-207ENST00000478800 CASP7P55210 303 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 FSTL1Q12841 308 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 SMC1BQ8NDV3 1235 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 ZNRF3Q9ULT6 936 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 RTL9Q8NET4 1388 aa21.46■■□□□ 1.03
CDKN1A-207ENST00000478800 L3MBTL3Q96JM7 780 aaPredicted RBP21.45■■□□□ 1.02
CDKN1A-207ENST00000478800 GGA1Q9UJY5 639 aa21.45■■□□□ 1.02
CDKN1A-207ENST00000478800 POTECB2RU33 542 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 G3V3G9 751 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 RIMBP2O15034 1052 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 ITGA6P23229 1130 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 LMOD1P29536 600 aaPredicted RBP21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 DCAF8Q5TAQ9 597 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 MPHOSPH8Q99549 860 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 ZC3H12CQ9C0D7 883 aaKnown RBP21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 BSDC1Q9NW68 430 aaPredicted RBP21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 HACL1Q9UJ83 578 aa21.44■■□□□ 1.02
CDKN1A-207ENST00000478800 ANKRD18BA2A2Z9 1011 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 UFL1O94874 794 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 CSF1RP07333 972 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 TBC1D16Q8TBP0 767 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 PODXL2Q9NZ53 605 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 POLLQ9UGP5 575 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
CDKN1A-207ENST00000478800 TAF1P21675 1872 aa21.42■■□□□ 1.02
CDKN1A-207ENST00000478800 XDHP47989 1333 aa21.42■■□□□ 1.02
CDKN1A-207ENST00000478800 IFIT5Q13325 482 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms