RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C16orf46Q6P387 395 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 ANKS3Q6ZW76 656 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 KIAA0907Q7Z7F0 614 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 PCGF5Q86SE9 256 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 SH3TC2Q8TF17 1288 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 PPM1EQ8WY54 764 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 IL17RAQ96F46 866 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 DEPDC7Q96QD5 511 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 FEZ1Q99689 392 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 ADAM33Q9BZ11 813 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 NIF3L1Q9GZT8 377 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 ZNF700Q9H0M5 742 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 C12orf49Q9H741 205 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 TSKSQ9UJT2 592 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 FBXO9Q9UK97 447 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 HCN4Q9Y3Q4 1203 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 USP31Q70CQ4 1352 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 BCORL1Q5H9F3 1711 aa3.7□□□□□ -1.82
HMGN4-202ENST00000477243 BLMP54132 1417 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 ZNF335Q9H4Z2 1342 aaPredicted RBP3.7□□□□□ -1.82
HMGN4-202ENST00000477243 IFT140Q96RY7 1462 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 COL6A3P12111 3177 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 ALG1L2C9J202 215 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 FZD6O60353 706 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 LDHAP00338 332 aaKnown RBP3.69□□□□□ -1.82
HMGN4-202ENST00000477243 MYL1P05976 194 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 CTSHP09668 335 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 GNALP38405 381 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 EIF1AXP47813 144 aaKnown RBP3.69□□□□□ -1.82
HMGN4-202ENST00000477243 EPHB1P54762 984 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 FUT2Q10981 343 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 IFRD2Q12894 506 aaPredicted RBP3.69□□□□□ -1.82
HMGN4-202ENST00000477243 OXLD1Q5BKU9 147 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 PPP4R4Q6NUP7 873 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 CAPN12Q6ZSI9 719 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 C16orf86Q6ZW13 317 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 KRT26Q7Z3Y9 468 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 FAM9BQ8IZU0 186 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 SYNPOQ8N3V7 929 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 ABTB2Q8N961 1025 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 SYMPKQ92797 1274 aaKnown RBP3.69□□□□□ -1.82
HMGN4-202ENST00000477243 CCDC113Q9H0I3 377 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 ZNF408Q9H9D4 720 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 LRRC4BQ9NT99 713 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 RNF19AQ9NV58 838 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 SNTG2Q9NY99 539 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 STIM2Q9P246 746 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 PCDHGA11Q9Y5H2 935 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 ZFHX4Q86UP3 3567 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 FHOD3Q2V2M9 1422 aa3.69□□□□□ -1.82
HMGN4-202ENST00000477243 ASH1LQ9NR48 2969 aaKnown RBP3.69□□□□□ -1.82
HMGN4-202ENST00000477243 RIMS1Q86UR5 1692 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 COL17A1Q9UMD9 1497 aaPredicted RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 TRIM6-TRIM34B2RNG4 842 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 GPR182O15218 404 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 KIF4AO95239 1232 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 IGHA2P01877 340 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 SLC10A3P09131 477 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 HCLS1P14317 486 aaPredicted RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 CD53P19397 219 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 PMLP29590 882 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 ST13P50502 369 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 EVA1CP58658 441 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 PPP4CP60510 307 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 TSGA10IPQ3SY00 556 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 DZIP3Q86Y13 1208 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 WDR75Q8IWA0 830 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 PAF1Q8N7H5 531 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 TSEN2Q8NCE0 465 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 PKNOX2Q96KN3 472 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 MPHOSPH6Q99547 160 aaKnown RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 DNAJC25Q9H1X3 360 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 AVENQ9NQS1 362 aaPredicted RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 SFMBT1Q9UHJ3 866 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 SCINQ9Y6U3 715 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 V9GY48 417 aaPredicted RBP3.68□□□□□ -1.82
HMGN4-202ENST00000477243 CPS1P31327 1500 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 FBN3Q75N90 2809 aa3.68□□□□□ -1.82
HMGN4-202ENST00000477243 TMEM265A0A087WTH1 108 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 ESPNB1AK53 854 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CCER2I3L3R5 266 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 TNFRSF10BO14763 440 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 BACH1O14867 736 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 NPHP1O15259 732 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 KLF4O43474 513 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 F12P00748 615 aaPredicted RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 FOSP01100 380 aaPredicted RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 PCSK2P16519 638 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 BDNFP23560 247 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CALRP27797 417 aaKnown RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CTCFP49711 727 aaPredicted RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 RBM6P78332 1123 aaKnown RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 PWP1Q13610 501 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 RAPGEF1Q13905 1077 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 RASA3Q14644 834 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 TCEA2Q15560 299 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 MAPRE1Q15691 268 aaKnown RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 NFE2Q16621 373 aaPredicted RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 AXDND1Q5T1B0 1012 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms