RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
COL4A6-206ENST00000477085 ZPR1O75312 459 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 CCDC8Q9H0W5 538 aaPredicted RBP17.76■□□□□ 0.43
COL4A6-206ENST00000477085 AOX1Q06278 1338 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 EYA2O00167 538 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 ITGA6P23229 1130 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 RFC4P35249 363 aa17.76■□□□□ 0.43
COL4A6-206ENST00000477085 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
COL4A6-206ENST00000477085 CIAO1O76071 339 aa17.75■□□□□ 0.43
COL4A6-206ENST00000477085 IFIT5Q13325 482 aaKnown RBP17.75■□□□□ 0.43
COL4A6-206ENST00000477085 ERFEQ4G0M1 354 aa17.75■□□□□ 0.43
COL4A6-206ENST00000477085 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
COL4A6-206ENST00000477085 TNNI3KQ59H18 835 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 FPGT-TNNI3KV9GXZ4 949 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 UBR3Q6ZT12 1888 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 DDX60Q8IY21 1712 aaKnown RBP17.74■□□□□ 0.43
COL4A6-206ENST00000477085 ADRA2BP18089 450 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 IL15P40933 162 aaPredicted RBP17.74■□□□□ 0.43
COL4A6-206ENST00000477085 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
COL4A6-206ENST00000477085 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
COL4A6-206ENST00000477085 CDC45O75419 566 aa17.73■□□□□ 0.43
COL4A6-206ENST00000477085 SETDB2Q96T68 719 aa17.73■□□□□ 0.43
COL4A6-206ENST00000477085 TTC41PQ6P2S7 1318 aa17.72■□□□□ 0.43
COL4A6-206ENST00000477085 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
COL4A6-206ENST00000477085 MAP4K4O95819 1239 aaPredicted RBP17.72■□□□□ 0.43
COL4A6-206ENST00000477085 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
COL4A6-206ENST00000477085 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
COL4A6-206ENST00000477085 DBNLQ9UJU6 430 aaKnown RBP17.72■□□□□ 0.43
COL4A6-206ENST00000477085 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
COL4A6-206ENST00000477085 ANKRD18BA2A2Z9 1011 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 SSFA2P28290 1259 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 GYS1P13807 737 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
COL4A6-206ENST00000477085 TIMM10P62072 90 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 NFIXQ14938 502 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 SLC10A5Q5PT55 438 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
COL4A6-206ENST00000477085 COL24A1Q17RW2 1714 aa17.7■□□□□ 0.42
COL4A6-206ENST00000477085 CCDC24Q8N4L8 307 aa17.7■□□□□ 0.42
COL4A6-206ENST00000477085 DBNDD2Q9BQY9 259 aa17.7■□□□□ 0.42
COL4A6-206ENST00000477085 COL4A1P02462 1669 aa17.7■□□□□ 0.42
COL4A6-206ENST00000477085 MYH3P11055 1940 aa17.7■□□□□ 0.42
COL4A6-206ENST00000477085 TRIM6-TRIM34B2RNG4 842 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 TAF7LQ5H9L4 462 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 RILPL2Q969X0 211 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 GPR108Q9NPR9 543 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 RIC1Q4ADV7 1423 aa17.69■□□□□ 0.42
COL4A6-206ENST00000477085 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
COL4A6-206ENST00000477085 NBPF5PQ86XG9 351 aaPredicted RBP17.68■□□□□ 0.42
COL4A6-206ENST00000477085 LAMB2P55268 1798 aa17.68■□□□□ 0.42
COL4A6-206ENST00000477085 TBC1D32Q96NH3 1257 aa17.68■□□□□ 0.42
COL4A6-206ENST00000477085 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
COL4A6-206ENST00000477085 SF3B3Q15393 1217 aaKnown RBP17.67■□□□□ 0.42
COL4A6-206ENST00000477085 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
COL4A6-206ENST00000477085 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
COL4A6-206ENST00000477085 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
COL4A6-206ENST00000477085 CEP126Q9P2H0 1117 aa17.67■□□□□ 0.42
COL4A6-206ENST00000477085 ERC2O15083 957 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 CHMLP26374 656 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 TM4SF1P30408 202 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 TPTE2Q6XPS3 522 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
COL4A6-206ENST00000477085 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 CAMKK2Q96RR4 588 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 BOLA2Q9H3K6 86 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 TFCP2L1Q9NZI6 479 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 LRP5O75197 1615 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 ZNF609O15014 1411 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 A0A1B0GUL7 405 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 EZH2Q15910 746 aaKnown RBP17.66■□□□□ 0.42
COL4A6-206ENST00000477085 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
COL4A6-206ENST00000477085 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
COL4A6-206ENST00000477085 ATP5JP18859 108 aa17.65■□□□□ 0.42
COL4A6-206ENST00000477085 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
COL4A6-206ENST00000477085 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
COL4A6-206ENST00000477085 CARMIL3Q8ND23 1372 aa17.64■□□□□ 0.42
COL4A6-206ENST00000477085 ADORA1P30542 326 aa17.64■□□□□ 0.41
COL4A6-206ENST00000477085 ANP32AP39687 249 aaKnown RBP17.64■□□□□ 0.41
COL4A6-206ENST00000477085 METTL24Q5JXM2 366 aa17.64■□□□□ 0.41
COL4A6-206ENST00000477085 C22orf23Q9BZE7 217 aa17.64■□□□□ 0.41
COL4A6-206ENST00000477085 IL25Q9H293 177 aa17.64■□□□□ 0.41
COL4A6-206ENST00000477085 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
COL4A6-206ENST00000477085 NDUFB9Q9Y6M9 179 aa17.63■□□□□ 0.41
COL4A6-206ENST00000477085 DDR1Q08345 913 aa17.63■□□□□ 0.41
COL4A6-206ENST00000477085 CNTROBQ8N137 903 aa17.63■□□□□ 0.41
COL4A6-206ENST00000477085 HELBQ8NG08 1087 aaPredicted RBP17.63■□□□□ 0.41
COL4A6-206ENST00000477085 UPF2Q9HAU5 1272 aaKnown RBP17.63■□□□□ 0.41
COL4A6-206ENST00000477085 RGPD3A6NKT7 1758 aaPredicted RBP17.62■□□□□ 0.41
COL4A6-206ENST00000477085 RGPD4Q7Z3J3 1758 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 PDE8BO95263 885 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 HMGB2P26583 209 aaKnown RBP17.62■□□□□ 0.41
COL4A6-206ENST00000477085 PRR5LQ6MZQ0 368 aa17.62■□□□□ 0.41
COL4A6-206ENST00000477085 XAGE2Q96GT9 111 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms