RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 VPS53Q5VIR6 699 aa13.84□□□□□ -0.19
NUP188-205ENST00000477069 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
NUP188-205ENST00000477069 PALLDQ8WX93 1383 aa13.84□□□□□ -0.19
NUP188-205ENST00000477069 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
NUP188-205ENST00000477069 MAP3K15Q6ZN16 1313 aa13.83□□□□□ -0.19
NUP188-205ENST00000477069 EYA2O00167 538 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 SLC27A2O14975 620 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
NUP188-205ENST00000477069 CPA1P15085 419 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 LAMA4Q16363 1823 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 STARD3NLO95772 234 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
NUP188-205ENST00000477069 LRRC24Q50LG9 513 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 USPL1Q5W0Q7 1092 aa13.83□□□□□ -0.2
NUP188-205ENST00000477069 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
NUP188-205ENST00000477069 TAF5LO75529 589 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 TSGA10IPQ3SY00 556 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 KIF6Q6ZMV9 814 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 FBXO41Q8TF61 875 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 LARGE1O95461 756 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 ZNF594Q96JF6 807 aaPredicted RBP13.82□□□□□ -0.2
NUP188-205ENST00000477069 NDUFB9Q9Y6M9 179 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 LRP5O75197 1615 aa13.82□□□□□ -0.2
NUP188-205ENST00000477069 CSF1RP07333 972 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
NUP188-205ENST00000477069 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 SLIT2O94813 1529 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 GAS2L3Q86XJ1 694 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
NUP188-205ENST00000477069 CHAMP1Q96JM3 812 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 PDRG1Q9NUG6 133 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 CYP46A1Q9Y6A2 500 aa13.81□□□□□ -0.2
NUP188-205ENST00000477069 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
NUP188-205ENST00000477069 EXOC5O00471 708 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
NUP188-205ENST00000477069 MRE11P49959 708 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 ST3GAL1Q11201 340 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 COL9A3Q14050 684 aaPredicted RBP13.8□□□□□ -0.2
NUP188-205ENST00000477069 TAF6LQ9Y6J9 622 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 SH3TC1Q8TE82 1336 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 CHGBP05060 677 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 HLFQ16534 295 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 KBTBD3Q8NAB2 608 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 PUS3Q9BZE2 481 aaKnown RBP13.8□□□□□ -0.2
NUP188-205ENST00000477069 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
NUP188-205ENST00000477069 SPATA31A1Q5TZJ5 1347 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 RIC1Q4ADV7 1423 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
NUP188-205ENST00000477069 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 ARAP2Q8WZ64 1704 aa13.8□□□□□ -0.2
NUP188-205ENST00000477069 TIMM10P62072 90 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUP188-205ENST00000477069 LARP6Q9BRS8 491 aaKnown RBP13.79□□□□□ -0.2
NUP188-205ENST00000477069 MYH7P12883 1935 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 COL5A3P25940 1745 aaPredicted RBP13.79□□□□□ -0.2
NUP188-205ENST00000477069 DDX46Q7L014 1031 aaKnown RBP13.79□□□□□ -0.2
NUP188-205ENST00000477069 NLRP10Q86W26 655 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
NUP188-205ENST00000477069 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 LAMB2P55268 1798 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 TCHHQ07283 1943 aa13.79□□□□□ -0.2
NUP188-205ENST00000477069 A0A1B0GUL7 405 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 ZNF831Q5JPB2 1677 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 FAM89AQ96GI7 184 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 WDR33Q9C0J8 1336 aaKnown RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 SH2B1Q9NRF2 756 aaPredicted RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 RNF20Q5VTR2 975 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
NUP188-205ENST00000477069 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
NUP188-205ENST00000477069 AKAP11Q9UKA4 1901 aa13.77□□□□□ -0.2
NUP188-205ENST00000477069 PSMA5P28066 241 aa13.77□□□□□ -0.2
NUP188-205ENST00000477069 ZNF445P59923 1031 aa13.77□□□□□ -0.2
NUP188-205ENST00000477069 ME3Q16798 604 aa13.77□□□□□ -0.2
NUP188-205ENST00000477069 MCMDC2Q4G0Z9 681 aa13.77□□□□□ -0.2
NUP188-205ENST00000477069 RPS6KB1P23443 525 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 KCNJ4P48050 445 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 FOXD4L5Q5VV16 416 aaPredicted RBP13.77□□□□□ -0.21
NUP188-205ENST00000477069 FOXD4L4Q8WXT5 416 aaPredicted RBP13.77□□□□□ -0.21
NUP188-205ENST00000477069 NEUROD6Q96NK8 337 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 BCORQ6W2J9 1755 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
NUP188-205ENST00000477069 CCDC129Q6ZRS4 1044 aa13.77□□□□□ -0.21
NUP188-205ENST00000477069 ERVV-1B6SEH8 477 aa13.76□□□□□ -0.21
NUP188-205ENST00000477069 PRIM1P49642 420 aaKnown RBP13.76□□□□□ -0.21
NUP188-205ENST00000477069 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms