RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 FRAT1Q92837 279 aaPredicted RBP22.5■■□□□ 1.19
SMIM4-202ENST00000476842 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
SMIM4-202ENST00000476842 CSF1RP07333 972 aa22.49■■□□□ 1.19
SMIM4-202ENST00000476842 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
SMIM4-202ENST00000476842 UTYO14607 1347 aa22.49■■□□□ 1.19
SMIM4-202ENST00000476842 GRIPAP1Q4V328 841 aa22.48■■□□□ 1.19
SMIM4-202ENST00000476842 ZKSCAN2Q63HK3 967 aa22.48■■□□□ 1.19
SMIM4-202ENST00000476842 RTKN2Q8IZC4 609 aa22.48■■□□□ 1.19
SMIM4-202ENST00000476842 ATP6V0A2Q9Y487 856 aa22.48■■□□□ 1.19
SMIM4-202ENST00000476842 NFKBIEO00221 500 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 NBPF7P0C2Y1 421 aaPredicted RBP22.47■■□□□ 1.19
SMIM4-202ENST00000476842 TRIM27P14373 513 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 RPS8P62241 208 aaKnown RBP22.47■■□□□ 1.19
SMIM4-202ENST00000476842 FOXO4P98177 505 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 OLFM4Q6UX06 510 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 TMC4Q7Z404 712 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 SP8Q8IXZ3 490 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 CELF1Q92879 486 aaKnown RBP22.47■■□□□ 1.19
SMIM4-202ENST00000476842 USP44Q9H0E7 712 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 SEC31BQ9NQW1 1179 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 ARFGEF1Q9Y6D6 1849 aa22.47■■□□□ 1.19
SMIM4-202ENST00000476842 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
SMIM4-202ENST00000476842 INTS3Q68E01 1043 aaKnown RBP22.46■■□□□ 1.19
SMIM4-202ENST00000476842 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
SMIM4-202ENST00000476842 YY1P25490 414 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 RASSF7Q02833 373 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 CCDC85AQ96PX6 553 aaPredicted RBP22.45■■□□□ 1.18
SMIM4-202ENST00000476842 GREM2Q9H772 168 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 LTBP3Q9NS15 1303 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 RTL9Q8NET4 1388 aa22.45■■□□□ 1.18
SMIM4-202ENST00000476842 LMNB1P20700 586 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 FKBP4Q02790 459 aaKnown RBP eCLIP22.43■■□□□ 1.18
SMIM4-202ENST00000476842 EPHA10Q5JZY3 1008 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 C9orf131Q5VYM1 1079 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 KAZALD1Q96I82 304 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 SUCLG2Q96I99 432 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 TAOK3Q9H2K8 898 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 TNNQ9UQP3 1299 aa22.43■■□□□ 1.18
SMIM4-202ENST00000476842 PRELPP51888 382 aa22.42■■□□□ 1.18
SMIM4-202ENST00000476842 LMBR1LQ6UX01 489 aa22.42■■□□□ 1.18
SMIM4-202ENST00000476842 CLUAP1Q96AJ1 413 aa22.42■■□□□ 1.18
SMIM4-202ENST00000476842 CDC5LQ99459 802 aaKnown RBP22.42■■□□□ 1.18
SMIM4-202ENST00000476842 PSMD1Q99460 953 aa22.42■■□□□ 1.18
SMIM4-202ENST00000476842 LAMB2P55268 1798 aa22.41■■□□□ 1.18
SMIM4-202ENST00000476842 SLC51AQ86UW1 340 aa22.41■■□□□ 1.18
SMIM4-202ENST00000476842 ANKRD18AQ8IVF6 992 aa22.41■■□□□ 1.18
SMIM4-202ENST00000476842 SNED1Q8TER0 1413 aa22.4■■□□□ 1.18
SMIM4-202ENST00000476842 ITGA6P23229 1130 aa22.4■■□□□ 1.18
SMIM4-202ENST00000476842 RNF181Q9P0P0 153 aa22.4■■□□□ 1.18
SMIM4-202ENST00000476842 FAM161AQ3B820 660 aa22.39■■□□□ 1.17
SMIM4-202ENST00000476842 DZIP1LQ8IYY4 767 aaKnown RBP22.39■■□□□ 1.17
SMIM4-202ENST00000476842 MPNDQ8N594 471 aa22.39■■□□□ 1.17
SMIM4-202ENST00000476842 ANKRD18BA2A2Z9 1011 aa22.38■■□□□ 1.17
SMIM4-202ENST00000476842 IFIT5Q13325 482 aaKnown RBP22.38■■□□□ 1.17
SMIM4-202ENST00000476842 RABL6Q3YEC7 729 aaPredicted RBP22.38■■□□□ 1.17
SMIM4-202ENST00000476842 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
SMIM4-202ENST00000476842 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
SMIM4-202ENST00000476842 BICC1Q9H694 974 aaKnown RBP22.38■■□□□ 1.17
SMIM4-202ENST00000476842 BSDC1Q9NW68 430 aaPredicted RBP22.38■■□□□ 1.17
SMIM4-202ENST00000476842 HDAC5Q9UQL6 1122 aa22.38■■□□□ 1.17
SMIM4-202ENST00000476842 UBTFL1P0CB47 393 aaPredicted RBP22.37■■□□□ 1.17
SMIM4-202ENST00000476842 DPP8Q6V1X1 898 aaPredicted RBP22.37■■□□□ 1.17
SMIM4-202ENST00000476842 ZNF277Q9NRM2 450 aaPredicted RBP22.37■■□□□ 1.17
SMIM4-202ENST00000476842 CHMP3Q9Y3E7 222 aa22.37■■□□□ 1.17
SMIM4-202ENST00000476842 GNAI3P08754 354 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 MS4A1P11836 297 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 IGHMBP2P38935 993 aaKnown RBP22.36■■□□□ 1.17
SMIM4-202ENST00000476842 CCDC57Q2TAC2 916 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 FTSJ3Q8IY81 847 aaKnown RBP22.36■■□□□ 1.17
SMIM4-202ENST00000476842 ANKRD44Q8N8A2 993 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 SUPT20HQ8NEM7 779 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 MEIS3Q99687 375 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 VPS33BQ9H267 617 aa22.36■■□□□ 1.17
SMIM4-202ENST00000476842 IARSP41252 1262 aaKnown RBP22.35■■□□□ 1.17
SMIM4-202ENST00000476842 GPSM2P81274 684 aa22.35■■□□□ 1.17
SMIM4-202ENST00000476842 PODXL2Q9NZ53 605 aa22.35■■□□□ 1.17
SMIM4-202ENST00000476842 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
SMIM4-202ENST00000476842 COL4A1P02462 1669 aa22.34■■□□□ 1.17
SMIM4-202ENST00000476842 CHD4Q14839 1912 aa22.34■■□□□ 1.17
SMIM4-202ENST00000476842 RLBP1P12271 317 aa22.34■■□□□ 1.17
SMIM4-202ENST00000476842 MINPP1Q9UNW1 487 aa22.34■■□□□ 1.17
SMIM4-202ENST00000476842 FER1L6Q2WGJ9 1857 aa22.34■■□□□ 1.17
SMIM4-202ENST00000476842 ZC3H4Q9UPT8 1303 aaKnown RBP22.33■■□□□ 1.17
SMIM4-202ENST00000476842 CACNA1SQ13698 1873 aa22.33■■□□□ 1.17
SMIM4-202ENST00000476842 MPHOSPH8Q99549 860 aa22.33■■□□□ 1.17
SMIM4-202ENST00000476842 PLIN1O60240 522 aa22.31■■□□□ 1.16
SMIM4-202ENST00000476842 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.31■■□□□ 1.16
SMIM4-202ENST00000476842 ANKIB1Q9P2G1 1089 aa22.31■■□□□ 1.16
SMIM4-202ENST00000476842 POLLQ9UGP5 575 aa22.31■■□□□ 1.16
SMIM4-202ENST00000476842 LRRFIP2Q9Y608 721 aaKnown RBP22.31■■□□□ 1.16
SMIM4-202ENST00000476842 TAF1P21675 1872 aa22.3■■□□□ 1.16
SMIM4-202ENST00000476842 TAF7LQ5H9L4 462 aa22.3■■□□□ 1.16
SMIM4-202ENST00000476842 LDHAL6AQ6ZMR3 332 aa22.3■■□□□ 1.16
SMIM4-202ENST00000476842 ZNF784Q8NCA9 323 aaPredicted RBP22.3■■□□□ 1.16
SMIM4-202ENST00000476842 TBC1D16Q8TBP0 767 aa22.3■■□□□ 1.16
SMIM4-202ENST00000476842 PANK1Q8TE04 598 aa22.3■■□□□ 1.16
SMIM4-202ENST00000476842 ZNF594Q96JF6 807 aaPredicted RBP22.3■■□□□ 1.16
SMIM4-202ENST00000476842 C6orf229H3BNL8 230 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms