RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 PPEF1O14829 653 aaPredicted RBP20.6■□□□□ 0.89
SRM-204ENST00000475189 GRAPQ13588 217 aa20.6■□□□□ 0.89
SRM-204ENST00000475189 SLC51AQ86UW1 340 aa20.6■□□□□ 0.89
SRM-204ENST00000475189 GRAPLQ8TC17 118 aaPredicted RBP20.6■□□□□ 0.89
SRM-204ENST00000475189 SNED1Q8TER0 1413 aa20.6■□□□□ 0.89
SRM-204ENST00000475189 COL4A1P02462 1669 aa20.59■□□□□ 0.89
SRM-204ENST00000475189 ALDH1L1O75891 902 aa20.59■□□□□ 0.89
SRM-204ENST00000475189 BBOX1O75936 387 aa20.59■□□□□ 0.89
SRM-204ENST00000475189 SRCIN1Q9C0H9 1055 aa20.59■□□□□ 0.89
SRM-204ENST00000475189 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
SRM-204ENST00000475189 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
SRM-204ENST00000475189 LMNB1P20700 586 aa20.58■□□□□ 0.89
SRM-204ENST00000475189 CC2D2BQ6DHV5 1058 aa20.58■□□□□ 0.89
SRM-204ENST00000475189 RTKN2Q8IZC4 609 aa20.58■□□□□ 0.89
SRM-204ENST00000475189 TAOK3Q9H2K8 898 aa20.58■□□□□ 0.89
SRM-204ENST00000475189 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
SRM-204ENST00000475189 CELF1Q92879 486 aaKnown RBP20.57■□□□□ 0.88
SRM-204ENST00000475189 PLA2G12BQ9BX93 195 aa20.57■□□□□ 0.88
SRM-204ENST00000475189 ATP6V0A2Q9Y487 856 aa20.57■□□□□ 0.88
SRM-204ENST00000475189 CTSWP56202 376 aa20.56■□□□□ 0.88
SRM-204ENST00000475189 FKBP4Q02790 459 aaKnown RBP eCLIP20.56■□□□□ 0.88
SRM-204ENST00000475189 SP8Q8IXZ3 490 aa20.56■□□□□ 0.88
SRM-204ENST00000475189 TTLL11Q8NHH1 800 aa20.56■□□□□ 0.88
SRM-204ENST00000475189 CCDC85AQ96PX6 553 aaPredicted RBP20.56■□□□□ 0.88
SRM-204ENST00000475189 SEC31BQ9NQW1 1179 aa20.56■□□□□ 0.88
SRM-204ENST00000475189 LRRC37AA6NMS7 1700 aa20.55■□□□□ 0.88
SRM-204ENST00000475189 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
SRM-204ENST00000475189 GRM8O00222 908 aa20.54■□□□□ 0.88
SRM-204ENST00000475189 BCAR3O75815 825 aa20.54■□□□□ 0.88
SRM-204ENST00000475189 GRIPAP1Q4V328 841 aa20.54■□□□□ 0.88
SRM-204ENST00000475189 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
SRM-204ENST00000475189 PSMD1Q99460 953 aa20.54■□□□□ 0.88
SRM-204ENST00000475189 C9orf78Q9NZ63 289 aaPredicted RBP20.54■□□□□ 0.88
SRM-204ENST00000475189 KIF16BQ96L93 1317 aa20.53■□□□□ 0.88
SRM-204ENST00000475189 RPS8P62241 208 aaKnown RBP20.53■□□□□ 0.88
SRM-204ENST00000475189 API5Q9BZZ5 524 aaKnown RBP20.53■□□□□ 0.88
SRM-204ENST00000475189 RTL9Q8NET4 1388 aa20.52■□□□□ 0.88
SRM-204ENST00000475189 CSF1RP07333 972 aa20.52■□□□□ 0.88
SRM-204ENST00000475189 ARHGAP45Q92619 1136 aa20.52■□□□□ 0.88
SRM-204ENST00000475189 TMX4Q9H1E5 349 aaPredicted RBP20.52■□□□□ 0.88
SRM-204ENST00000475189 GREM2Q9H772 168 aa20.52■□□□□ 0.88
SRM-204ENST00000475189 ZNF277Q9NRM2 450 aaPredicted RBP20.52■□□□□ 0.88
SRM-204ENST00000475189 SPEF2Q9C093 1822 aa20.52■□□□□ 0.88
SRM-204ENST00000475189 FOXO4P98177 505 aa20.51■□□□□ 0.87
SRM-204ENST00000475189 UTYO14607 1347 aa20.51■□□□□ 0.87
SRM-204ENST00000475189 ZC3H4Q9UPT8 1303 aaKnown RBP20.51■□□□□ 0.87
SRM-204ENST00000475189 NBPF7P0C2Y1 421 aaPredicted RBP20.5■□□□□ 0.87
SRM-204ENST00000475189 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
SRM-204ENST00000475189 IARSP41252 1262 aaKnown RBP20.49■□□□□ 0.87
SRM-204ENST00000475189 ANKRD18AQ8IVF6 992 aa20.49■□□□□ 0.87
SRM-204ENST00000475189 MPNDQ8N594 471 aa20.49■□□□□ 0.87
SRM-204ENST00000475189 ZNF526Q8TF50 670 aaPredicted RBP20.49■□□□□ 0.87
SRM-204ENST00000475189 IPO8O15397 1037 aaKnown RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 CCT4P50991 539 aaKnown RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 DPP8Q6V1X1 898 aaPredicted RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 FRAT1Q92837 279 aaPredicted RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 KAZALD1Q96I82 304 aa20.48■□□□□ 0.87
SRM-204ENST00000475189 SUCLG2Q96I99 432 aa20.48■□□□□ 0.87
SRM-204ENST00000475189 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 RTFDC1Q9BY42 306 aaPredicted RBP20.48■□□□□ 0.87
SRM-204ENST00000475189 USP44Q9H0E7 712 aa20.48■□□□□ 0.87
SRM-204ENST00000475189 LTBP1Q14766 1721 aa20.47■□□□□ 0.87
SRM-204ENST00000475189 DUOX1Q9NRD9 1551 aa20.47■□□□□ 0.87
SRM-204ENST00000475189 ITGA6P23229 1130 aa20.47■□□□□ 0.87
SRM-204ENST00000475189 FAM161AQ3B820 660 aa20.47■□□□□ 0.87
SRM-204ENST00000475189 COL4A5P29400 1685 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 TRIM27P14373 513 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 GPSM2P81274 684 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 ATF7IPQ6VMQ6 1270 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 SUPT20HQ8NEM7 779 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 GPBP1L1Q9HC44 474 aaPredicted RBP20.46■□□□□ 0.87
SRM-204ENST00000475189 TNNQ9UQP3 1299 aa20.46■□□□□ 0.87
SRM-204ENST00000475189 C1QTNF8P60827 252 aa20.45■□□□□ 0.86
SRM-204ENST00000475189 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
SRM-204ENST00000475189 NSFL1CQ9UNZ2 370 aaKnown RBP20.45■□□□□ 0.86
SRM-204ENST00000475189 GLTPD2A6NH11 291 aa20.44■□□□□ 0.86
SRM-204ENST00000475189 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
SRM-204ENST00000475189 INTS3Q68E01 1043 aaKnown RBP20.44■□□□□ 0.86
SRM-204ENST00000475189 VPS33BQ9H267 617 aa20.44■□□□□ 0.86
SRM-204ENST00000475189 CHMP3Q9Y3E7 222 aa20.44■□□□□ 0.86
SRM-204ENST00000475189 ANKRD18BA2A2Z9 1011 aa20.43■□□□□ 0.86
SRM-204ENST00000475189 IGHMBP2P38935 993 aaKnown RBP20.43■□□□□ 0.86
SRM-204ENST00000475189 AOC3Q16853 763 aa20.43■□□□□ 0.86
SRM-204ENST00000475189 LARGE2Q8N3Y3 721 aa20.43■□□□□ 0.86
SRM-204ENST00000475189 BICC1Q9H694 974 aaKnown RBP20.43■□□□□ 0.86
SRM-204ENST00000475189 PODXL2Q9NZ53 605 aa20.43■□□□□ 0.86
SRM-204ENST00000475189 POLLQ9UGP5 575 aa20.43■□□□□ 0.86
SRM-204ENST00000475189 FZD9O00144 591 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 PPIP5K2O43314 1243 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 IFIT5Q13325 482 aaKnown RBP20.42■□□□□ 0.86
SRM-204ENST00000475189 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 CLUAP1Q96AJ1 413 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 MINPP1Q9UNW1 487 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 KDM2BQ8NHM5 1336 aa20.42■□□□□ 0.86
SRM-204ENST00000475189 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
SRM-204ENST00000475189 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
SRM-204ENST00000475189 DPY19L2Q6NUT2 758 aa20.41■□□□□ 0.86
SRM-204ENST00000475189 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
SRM-204ENST00000475189 TBC1D16Q8TBP0 767 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms