RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ABCC12Q96J65 1359 aa26.23■■□□□ 1.79
CCM2-206ENST00000474617 ZNF609O15014 1411 aa26.23■■□□□ 1.79
CCM2-206ENST00000474617 LOC102724428A0A0B4J2F2 783 aa26.23■■□□□ 1.79
CCM2-206ENST00000474617 ZKSCAN1P17029 563 aaPredicted RBP26.23■■□□□ 1.79
CCM2-206ENST00000474617 SIK1P57059 783 aa26.23■■□□□ 1.79
CCM2-206ENST00000474617 CCDC171Q6TFL3 1326 aa26.23■■□□□ 1.79
CCM2-206ENST00000474617 CUL4AQ13619 759 aa26.22■■□□□ 1.79
CCM2-206ENST00000474617 GSE1Q14687 1217 aa26.22■■□□□ 1.79
CCM2-206ENST00000474617 RNF20Q5VTR2 975 aa26.22■■□□□ 1.79
CCM2-206ENST00000474617 PALD1Q9ULE6 856 aa26.22■■□□□ 1.79
CCM2-206ENST00000474617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.22■■□□□ 1.79
CCM2-206ENST00000474617 MED23Q9ULK4 1368 aa26.21■■□□□ 1.79
CCM2-206ENST00000474617 PARP10Q53GL7 1025 aa26.21■■□□□ 1.79
CCM2-206ENST00000474617 NUP98P52948 1817 aa26.21■■□□□ 1.79
CCM2-206ENST00000474617 KAT6BQ8WYB5 2073 aa26.21■■□□□ 1.79
CCM2-206ENST00000474617 BCL9LQ86UU0 1499 aa26.21■■□□□ 1.79
CCM2-206ENST00000474617 PALLDQ8WX93 1383 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 ATP6V1AP38606 617 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 TAF7LQ5H9L4 462 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 ZNF34Q8IZ26 560 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 IL25Q9H293 177 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 HMG20BQ9P0W2 317 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 SNX14Q9Y5W7 946 aa26.2■■□□□ 1.79
CCM2-206ENST00000474617 MAP4K1Q92918 833 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 NGLY1Q96IV0 654 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 DBNDD2Q9BQY9 259 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 MYH3P11055 1940 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 GOLGA6L22H0YM25 854 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 PDE8AO60658 829 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 NMIQ13287 307 aaPredicted RBP26.19■■□□□ 1.78
CCM2-206ENST00000474617 TMX3Q96JJ7 454 aa26.19■■□□□ 1.78
CCM2-206ENST00000474617 PSMA5P28066 241 aa26.18■■□□□ 1.78
CCM2-206ENST00000474617 CTSWP56202 376 aa26.18■■□□□ 1.78
CCM2-206ENST00000474617 HLFQ16534 295 aa26.18■■□□□ 1.78
CCM2-206ENST00000474617 INTS5Q6P9B9 1019 aaKnown RBP26.18■■□□□ 1.78
CCM2-206ENST00000474617 KBTBD3Q8NAB2 608 aa26.18■■□□□ 1.78
CCM2-206ENST00000474617 TNPO1Q92973 898 aaKnown RBP26.18■■□□□ 1.78
CCM2-206ENST00000474617 FAM89AQ96GI7 184 aa26.18■■□□□ 1.78
CCM2-206ENST00000474617 ANKRD18BA2A2Z9 1011 aa26.17■■□□□ 1.78
CCM2-206ENST00000474617 CRKLP46109 303 aaKnown RBP26.17■■□□□ 1.78
CCM2-206ENST00000474617 SKOR2Q2VWA4 1001 aaPredicted RBP26.17■■□□□ 1.78
CCM2-206ENST00000474617 ARXQ96QS3 562 aa26.17■■□□□ 1.78
CCM2-206ENST00000474617 TRMT112Q9UI30 125 aaKnown RBP26.17■■□□□ 1.78
CCM2-206ENST00000474617 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
CCM2-206ENST00000474617 NECTIN1Q15223 517 aa26.16■■□□□ 1.78
CCM2-206ENST00000474617 SH3TC1Q8TE82 1336 aa26.15■■□□□ 1.78
CCM2-206ENST00000474617 IRS4O14654 1257 aaPredicted RBP26.15■■□□□ 1.78
CCM2-206ENST00000474617 TSGA10IPQ3SY00 556 aa26.15■■□□□ 1.78
CCM2-206ENST00000474617 CCDC158Q5M9N0 1113 aa26.15■■□□□ 1.78
CCM2-206ENST00000474617 TTLL11Q8NHH1 800 aa26.15■■□□□ 1.78
CCM2-206ENST00000474617 A0A1B0GUL7 405 aa26.14■■□□□ 1.78
CCM2-206ENST00000474617 KRT32Q14532 448 aa26.14■■□□□ 1.78
CCM2-206ENST00000474617 VPS53Q5VIR6 699 aa26.14■■□□□ 1.78
CCM2-206ENST00000474617 NEUROD6Q96NK8 337 aa26.14■■□□□ 1.78
CCM2-206ENST00000474617 COL5A3P25940 1745 aaPredicted RBP26.14■■□□□ 1.78
CCM2-206ENST00000474617 CYP2E1P05181 493 aaPredicted RBP26.14■■□□□ 1.77
CCM2-206ENST00000474617 KCNJ4P48050 445 aa26.14■■□□□ 1.77
CCM2-206ENST00000474617 CLEC4GQ6UXB4 293 aa26.14■■□□□ 1.77
CCM2-206ENST00000474617 HELLSQ9NRZ9 838 aa26.14■■□□□ 1.77
CCM2-206ENST00000474617 LRRC24Q50LG9 513 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 ZSCAN31Q96LW9 406 aaPredicted RBP26.13■■□□□ 1.77
CCM2-206ENST00000474617 FAM227BQ96M60 508 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 TTC14Q96N46 770 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 C8orf37Q96NL8 207 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 ZSWIM6Q9HCJ5 1215 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 PAG1Q9NWQ8 432 aa26.13■■□□□ 1.77
CCM2-206ENST00000474617 PDIA4P13667 645 aaKnown RBP26.12■■□□□ 1.77
CCM2-206ENST00000474617 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
CCM2-206ENST00000474617 USPL1Q5W0Q7 1092 aa26.12■■□□□ 1.77
CCM2-206ENST00000474617 ACSBG1Q96GR2 724 aa26.12■■□□□ 1.77
CCM2-206ENST00000474617 ZNF512BQ96KM6 892 aaPredicted RBP26.12■■□□□ 1.77
CCM2-206ENST00000474617 ALDH8A1Q9H2A2 487 aaPredicted RBP26.12■■□□□ 1.77
CCM2-206ENST00000474617 RBM8AQ9Y5S9 174 aaKnown RBP26.12■■□□□ 1.77
CCM2-206ENST00000474617 CYP46A1Q9Y6A2 500 aa26.12■■□□□ 1.77
CCM2-206ENST00000474617 RTL9Q8NET4 1388 aa26.12■■□□□ 1.77
CCM2-206ENST00000474617 THSD7AQ9UPZ6 1657 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 A0A0D9SFI3 127 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 ZFYP08048 801 aaPredicted RBP26.11■■□□□ 1.77
CCM2-206ENST00000474617 GPTP24298 496 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 PTH1RQ03431 593 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 LIMCH1Q9UPQ0 1083 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 U3KPZ7 1027 aaPredicted RBP26.11■■□□□ 1.77
CCM2-206ENST00000474617 LRP5O75197 1615 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 CNTNAP4Q9C0A0 1308 aa26.11■■□□□ 1.77
CCM2-206ENST00000474617 IFIT1P09914 478 aaKnown RBP26.1■■□□□ 1.77
CCM2-206ENST00000474617 ITGA6P23229 1130 aa26.1■■□□□ 1.77
CCM2-206ENST00000474617 ANKRD1Q15327 319 aa26.1■■□□□ 1.77
CCM2-206ENST00000474617 FAM98CQ17RN3 349 aaKnown RBP26.1■■□□□ 1.77
CCM2-206ENST00000474617 CREB3L3Q68CJ9 461 aa26.1■■□□□ 1.77
CCM2-206ENST00000474617 UTP14AQ9BVJ6 771 aaKnown RBP26.1■■□□□ 1.77
CCM2-206ENST00000474617 SH2B1Q9NRF2 756 aaPredicted RBP26.1■■□□□ 1.77
CCM2-206ENST00000474617 TBC1D2BQ9UPU7 963 aa26.1■■□□□ 1.77
CCM2-206ENST00000474617 RIPOR2Q9Y4F9 1068 aa26.1■■□□□ 1.77
CCM2-206ENST00000474617 CAMTA2O94983 1202 aa26.09■■□□□ 1.77
CCM2-206ENST00000474617 PRPF40BQ6NWY9 871 aaKnown RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 ZNF594Q96JF6 807 aaPredicted RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 DNAJC2Q99543 621 aaKnown RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 RPAP1Q9BWH6 1393 aaPredicted RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 ITPK1Q13572 414 aa26.09■■□□□ 1.77
CCM2-206ENST00000474617 GORABQ5T7V8 394 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms