RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 CKAP2LQ8IYA6 745 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
SAMM50-203ENST00000474323 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 TSPYL4Q9UJ04 414 aa17.13■□□□□ 0.33
SAMM50-203ENST00000474323 ERBB3P21860 1342 aa17.12■□□□□ 0.33
SAMM50-203ENST00000474323 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
SAMM50-203ENST00000474323 LARGE1O95461 756 aa17.12■□□□□ 0.33
SAMM50-203ENST00000474323 HMGB1P09429 215 aaKnown RBP17.12■□□□□ 0.33
SAMM50-203ENST00000474323 SARM1Q6SZW1 724 aa17.12■□□□□ 0.33
SAMM50-203ENST00000474323 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
SAMM50-203ENST00000474323 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 CLSTN2Q9H4D0 955 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 CASTP20810 708 aaKnown RBP17.11■□□□□ 0.33
SAMM50-203ENST00000474323 MRFAP1L1Q96HT8 127 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 ZNF446Q9NWS9 450 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
SAMM50-203ENST00000474323 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-203ENST00000474323 F6X3S4 739 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 H2AFXP16104 143 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-203ENST00000474323 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.1■□□□□ 0.33
SAMM50-203ENST00000474323 CHMP3Q9Y3E7 222 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 V9GYY5 206 aaPredicted RBP17.1■□□□□ 0.33
SAMM50-203ENST00000474323 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 SKILP12757 684 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 NLRP2Q9NX02 1062 aa17.1■□□□□ 0.33
SAMM50-203ENST00000474323 PDCP20941 246 aa17.09■□□□□ 0.33
SAMM50-203ENST00000474323 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
SAMM50-203ENST00000474323 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
SAMM50-203ENST00000474323 ST7Q9NRC1 585 aa17.09■□□□□ 0.33
SAMM50-203ENST00000474323 LRRC37A3O60309 1634 aa17.09■□□□□ 0.33
SAMM50-203ENST00000474323 ZNF530Q6P9A1 599 aaPredicted RBP17.09■□□□□ 0.33
SAMM50-203ENST00000474323 PLCD3Q8N3E9 789 aa17.09■□□□□ 0.33
SAMM50-203ENST00000474323 COL18A1P39060 1754 aa17.08■□□□□ 0.33
SAMM50-203ENST00000474323 CSB-PGBD3P0DP91 1061 aa17.08■□□□□ 0.33
SAMM50-203ENST00000474323 PLEKHO1Q53GL0 409 aaPredicted RBP17.08■□□□□ 0.33
SAMM50-203ENST00000474323 G2E3Q7L622 706 aa17.08■□□□□ 0.33
SAMM50-203ENST00000474323 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.33
SAMM50-203ENST00000474323 CCDC9Q9Y3X0 531 aaKnown RBP17.08■□□□□ 0.33
SAMM50-203ENST00000474323 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
SAMM50-203ENST00000474323 CCAR2Q8N163 923 aaKnown RBP17.08■□□□□ 0.32
SAMM50-203ENST00000474323 ZSWIM6Q9HCJ5 1215 aa17.08■□□□□ 0.32
SAMM50-203ENST00000474323 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.08■□□□□ 0.32
SAMM50-203ENST00000474323 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
SAMM50-203ENST00000474323 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 SPATA32Q96LK8 384 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 L2HGDHQ9H9P8 463 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 LGR6Q9HBX8 967 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 FHOD1Q9Y613 1164 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 CAMTA1Q9Y6Y1 1673 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
SAMM50-203ENST00000474323 CPA1P15085 419 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 TEX35Q5T0J7 233 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 FEZ2Q9UHY8 353 aaPredicted RBP17.06■□□□□ 0.32
SAMM50-203ENST00000474323 CCZ1BP86790 482 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 CCZ1P86791 482 aaPredicted RBP17.06■□□□□ 0.32
SAMM50-203ENST00000474323 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 IQCB1Q15051 598 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
SAMM50-203ENST00000474323 ME3Q16798 604 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 AMOTQ4VCS5 1084 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 KCNB2Q92953 911 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
SAMM50-203ENST00000474323 SOS1Q07889 1333 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-203ENST00000474323 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
SAMM50-203ENST00000474323 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
SAMM50-203ENST00000474323 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
SAMM50-203ENST00000474323 CCDC69A6NI79 296 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 C1orf141Q5JVX7 400 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 LEO1Q8WVC0 666 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-203ENST00000474323 IL1RAPL2Q9NP60 686 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 CPDO75976 1380 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 NR1I2O75469 434 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 TUBB4AP04350 444 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 RAD51AP2Q09MP3 1159 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 ARID5BQ14865 1188 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
SAMM50-203ENST00000474323 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
SAMM50-203ENST00000474323 CEMIPQ8WUJ3 1361 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 MAP4K4O95819 1239 aaPredicted RBP17.03■□□□□ 0.32
SAMM50-203ENST00000474323 PNMA6AP0CW24 399 aaPredicted RBP17.03■□□□□ 0.32
SAMM50-203ENST00000474323 MUM1L1Q5H9M0 696 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 CWC27Q6UX04 472 aaKnown RBP17.03■□□□□ 0.32
SAMM50-203ENST00000474323 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 CLCN6P51797 869 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 GSDMDP57764 484 aa17.03■□□□□ 0.32
SAMM50-203ENST00000474323 TPM4P67936 248 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms