RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 KCNF1Q9H3M0 494 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
LSS-208ENST00000474319 KRT85P78386 507 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 ARID5BQ14865 1188 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 FILIP1Q7Z7B0 1213 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 PIBF1Q8WXW3 757 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 ARHGEF10O15013 1369 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
LSS-208ENST00000474319 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
LSS-208ENST00000474319 KIF3AQ9Y496 699 aa12.74□□□□□ -0.37
LSS-208ENST00000474319 ERBB3P21860 1342 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 TYRO3Q06418 890 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 MAP3K11Q16584 847 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 MYD88Q99836 296 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 SLC27A2O14975 620 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 U2AF2P26368 475 aaKnown RBP eCLIP12.73□□□□□ -0.37
LSS-208ENST00000474319 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 NR1I2O75469 434 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 POLA2Q14181 598 aa12.73□□□□□ -0.37
LSS-208ENST00000474319 ADAMTSL3P82987 1691 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 SASH1O94885 1247 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 ISM2Q6H9L7 571 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 BCL2L12Q9HB09 334 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 NCOA5Q9HCD5 579 aaKnown RBP12.72□□□□□ -0.37
LSS-208ENST00000474319 FAM182BQ5T319 152 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 FAM184AQ8NB25 1140 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
LSS-208ENST00000474319 A0A0G2JLW4 131 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 BRF1Q92994 677 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 MCM5P33992 734 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 ATP2B3Q16720 1220 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 OTUD7BQ6GQQ9 843 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 MYRIPQ8NFW9 859 aa12.71□□□□□ -0.37
LSS-208ENST00000474319 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.38
LSS-208ENST00000474319 PTPN21Q16825 1174 aa12.71□□□□□ -0.38
LSS-208ENST00000474319 C8orf37Q96NL8 207 aa12.71□□□□□ -0.38
LSS-208ENST00000474319 SSH2Q76I76 1423 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 HSP90AB4PQ58FF6 505 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 UBE3BQ7Z3V4 1068 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 CBX8Q9HC52 389 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 DBF4Q9UBU7 674 aaPredicted RBP12.7□□□□□ -0.38
LSS-208ENST00000474319 ADCY9O60503 1353 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 AKAP4Q5JQC9 854 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 VPS53Q5VIR6 699 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 EVI5LQ96CN4 794 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 MRVI1Q9Y6F6 885 aa12.7□□□□□ -0.38
LSS-208ENST00000474319 ITSN1Q15811 1721 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 PEAK1Q9H792 1746 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 GRM8O00222 908 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 TPD52L1Q16890 204 aaPredicted RBP12.69□□□□□ -0.38
LSS-208ENST00000474319 Q6ZUG5 572 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 BIN1O00499 593 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 ZNF165P49910 485 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 HAND2P61296 217 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 AMOTQ4VCS5 1084 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 PDCL2Q8N4E4 241 aa12.69□□□□□ -0.38
LSS-208ENST00000474319 TFCP2Q12800 502 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 IFNL2Q8IZJ0 200 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 GOLGA6L6A8MZA4 724 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 MST1RQ04912 1400 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 APOBRQ0VD83 1088 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 KSR2Q6VAB6 950 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 CLIP2Q9UDT6 1046 aa12.68□□□□□ -0.38
LSS-208ENST00000474319 CYP27B1O15528 508 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 LEO1Q8WVC0 666 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 KAZALD1Q96I82 304 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 GJB4Q9NTQ9 266 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 BECN2A8MW95 431 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 GIGYF1O75420 1035 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 KCNQ4P56696 695 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 UVSSAQ2YD98 709 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 GOLIM4O00461 696 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 TIMM10P62072 90 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 HSP90AA4PQ58FG1 418 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 KIAA1524Q8TCG1 905 aa12.67□□□□□ -0.38
LSS-208ENST00000474319 ZSCAN31Q96LW9 406 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 SH2B1Q9NRF2 756 aaPredicted RBP12.67□□□□□ -0.38
LSS-208ENST00000474319 LETM1O95202 739 aaPredicted RBP12.66□□□□□ -0.38
LSS-208ENST00000474319 TNNT1P13805 278 aa12.66□□□□□ -0.38
LSS-208ENST00000474319 PSMA5P28066 241 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms