RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 FTSJ3Q8IY81 847 aaKnown RBP15.65■□□□□ 0.1
DDX56-209ENST00000473924 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
DDX56-209ENST00000473924 SLX4Q8IY92 1834 aa15.65■□□□□ 0.1
DDX56-209ENST00000473924 PPEF1O14829 653 aaPredicted RBP15.64■□□□□ 0.09
DDX56-209ENST00000473924 GRAPQ13588 217 aa15.64■□□□□ 0.09
DDX56-209ENST00000473924 SOGA3Q5TF21 947 aa15.64■□□□□ 0.09
DDX56-209ENST00000473924 GRAPLQ8TC17 118 aaPredicted RBP15.64■□□□□ 0.09
DDX56-209ENST00000473924 PLA2G12BQ9BX93 195 aa15.64■□□□□ 0.09
DDX56-209ENST00000473924 TNNQ9UQP3 1299 aa15.64■□□□□ 0.09
DDX56-209ENST00000473924 MYH3P11055 1940 aa15.63■□□□□ 0.09
DDX56-209ENST00000473924 BBOX1O75936 387 aa15.63■□□□□ 0.09
DDX56-209ENST00000473924 NBPF7P0C2Y1 421 aaPredicted RBP15.63■□□□□ 0.09
DDX56-209ENST00000473924 INTS3Q68E01 1043 aaKnown RBP15.63■□□□□ 0.09
DDX56-209ENST00000473924 TTLL11Q8NHH1 800 aa15.63■□□□□ 0.09
DDX56-209ENST00000473924 CHMP3Q9Y3E7 222 aa15.63■□□□□ 0.09
DDX56-209ENST00000473924 CCDC93Q567U6 631 aa15.62■□□□□ 0.09
DDX56-209ENST00000473924 DZIP1LQ8IYY4 767 aaKnown RBP15.62■□□□□ 0.09
DDX56-209ENST00000473924 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
DDX56-209ENST00000473924 USP44Q9H0E7 712 aa15.62■□□□□ 0.09
DDX56-209ENST00000473924 SEC31BQ9NQW1 1179 aa15.62■□□□□ 0.09
DDX56-209ENST00000473924 UTYO14607 1347 aa15.62■□□□□ 0.09
DDX56-209ENST00000473924 GOLGB1Q14789 3259 aaKnown RBP15.62■□□□□ 0.09
DDX56-209ENST00000473924 UBTFL1P0CB47 393 aaPredicted RBP15.61■□□□□ 0.09
DDX56-209ENST00000473924 MS4A1P11836 297 aa15.61■□□□□ 0.09
DDX56-209ENST00000473924 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
DDX56-209ENST00000473924 C7orf43Q8WVR3 580 aa15.61■□□□□ 0.09
DDX56-209ENST00000473924 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
DDX56-209ENST00000473924 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
DDX56-209ENST00000473924 GREM2Q9H772 168 aa15.61■□□□□ 0.09
DDX56-209ENST00000473924 CSF1RP07333 972 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 RPS8P62241 208 aaKnown RBP15.6■□□□□ 0.09
DDX56-209ENST00000473924 FOXO4P98177 505 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 CC2D2BQ6DHV5 1058 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 LMBR1LQ6UX01 489 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 OLFM4Q6UX06 510 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 TMC4Q7Z404 712 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 ANKRD18AQ8IVF6 992 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 RTKN2Q8IZC4 609 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 TMEM57Q8N5G2 664 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 HDAC5Q9UQL6 1122 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 ATP6V0A2Q9Y487 856 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 TAF1P21675 1872 aa15.6■□□□□ 0.09
DDX56-209ENST00000473924 PLIN1O60240 522 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 ITGA6P23229 1130 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 RASSF7Q02833 373 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 ITPRIPQ8IWB1 547 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 SP8Q8IXZ3 490 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 RTL9Q8NET4 1388 aa15.59■□□□□ 0.09
DDX56-209ENST00000473924 ANKRD18BA2A2Z9 1011 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 NFKBIEO00221 500 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 GNAI3P08754 354 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
DDX56-209ENST00000473924 IFIT5Q13325 482 aaKnown RBP15.58■□□□□ 0.08
DDX56-209ENST00000473924 CCDC57Q2TAC2 916 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 MEIS3Q99687 375 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 TAOK3Q9H2K8 898 aa15.58■□□□□ 0.08
DDX56-209ENST00000473924 BICC1Q9H694 974 aaKnown RBP15.58■□□□□ 0.08
DDX56-209ENST00000473924 CHD4Q14839 1912 aa15.57■□□□□ 0.08
DDX56-209ENST00000473924 RLBP1P12271 317 aa15.57■□□□□ 0.08
DDX56-209ENST00000473924 TAF7LQ5H9L4 462 aa15.57■□□□□ 0.08
DDX56-209ENST00000473924 KAZALD1Q96I82 304 aa15.57■□□□□ 0.08
DDX56-209ENST00000473924 MPHOSPH8Q99549 860 aa15.57■□□□□ 0.08
DDX56-209ENST00000473924 LMNB1P20700 586 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX56-209ENST00000473924 DPP8Q6V1X1 898 aaPredicted RBP15.56■□□□□ 0.08
DDX56-209ENST00000473924 SLC51AQ86UW1 340 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 MPNDQ8N594 471 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 PANK1Q8TE04 598 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 RNF181Q9P0P0 153 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 LTBP3Q9NS15 1303 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 FER1L6Q2WGJ9 1857 aa15.56■□□□□ 0.08
DDX56-209ENST00000473924 COL4A1P02462 1669 aa15.55■□□□□ 0.08
DDX56-209ENST00000473924 C9orf131Q5VYM1 1079 aa15.55■□□□□ 0.08
DDX56-209ENST00000473924 BSDC1Q9NW68 430 aaPredicted RBP15.55■□□□□ 0.08
DDX56-209ENST00000473924 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
DDX56-209ENST00000473924 LRRFIP2Q9Y608 721 aaKnown RBP15.55■□□□□ 0.08
DDX56-209ENST00000473924 UTRNP46939 3433 aa15.55■□□□□ 0.08
DDX56-209ENST00000473924 YY1P25490 414 aa15.54■□□□□ 0.08
DDX56-209ENST00000473924 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
DDX56-209ENST00000473924 ANKRD44Q8N8A2 993 aa15.54■□□□□ 0.08
DDX56-209ENST00000473924 SUPT20HQ8NEM7 779 aa15.54■□□□□ 0.08
DDX56-209ENST00000473924 PSMD1Q99460 953 aa15.54■□□□□ 0.08
DDX56-209ENST00000473924 ANKIB1Q9P2G1 1089 aa15.54■□□□□ 0.08
DDX56-209ENST00000473924 SPEF2Q9C093 1822 aa15.53■□□□□ 0.08
DDX56-209ENST00000473924 GNAI2P04899 355 aa15.53■□□□□ 0.08
DDX56-209ENST00000473924 ZNF594Q96JF6 807 aaPredicted RBP15.53■□□□□ 0.08
DDX56-209ENST00000473924 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
DDX56-209ENST00000473924 LRRC37AA6NMS7 1700 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 C6orf229H3BNL8 230 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 GPSM2P81274 684 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 PDE3AQ14432 1141 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
DDX56-209ENST00000473924 LDHAL6AQ6ZMR3 332 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 COG6Q9Y2V7 657 aa15.52■□□□□ 0.08
DDX56-209ENST00000473924 SBF1O95248 1867 aa15.52■□□□□ 0.07
DDX56-209ENST00000473924 SNED1Q8TER0 1413 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms