RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 ADARB2Q9NS39 739 aaKnown RBP25.32■■□□□ 1.64
APTX-218ENST00000473270 ADAMTS8Q9UP79 889 aa25.32■■□□□ 1.64
APTX-218ENST00000473270 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
APTX-218ENST00000473270 LRP10Q7Z4F1 713 aa25.31■■□□□ 1.64
APTX-218ENST00000473270 WDR33Q9C0J8 1336 aaKnown RBP25.31■■□□□ 1.64
APTX-218ENST00000473270 CHL1O00533 1208 aa25.29■■□□□ 1.64
APTX-218ENST00000473270 GRAPQ13588 217 aa25.29■■□□□ 1.64
APTX-218ENST00000473270 CIAPIN1Q6FI81 312 aa25.29■■□□□ 1.64
APTX-218ENST00000473270 GRAPLQ8TC17 118 aaPredicted RBP25.29■■□□□ 1.64
APTX-218ENST00000473270 RTFDC1Q9BY42 306 aaPredicted RBP25.29■■□□□ 1.64
APTX-218ENST00000473270 GPRC5DQ9NZD1 345 aa25.29■■□□□ 1.64
APTX-218ENST00000473270 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
APTX-218ENST00000473270 HOXB7P09629 217 aa25.28■■□□□ 1.64
APTX-218ENST00000473270 GRM1Q13255 1194 aa25.28■■□□□ 1.64
APTX-218ENST00000473270 WBP1LQ9NX94 342 aa25.28■■□□□ 1.64
APTX-218ENST00000473270 CHPF2Q9P2E5 772 aa25.28■■□□□ 1.64
APTX-218ENST00000473270 ADAMTSL1Q8N6G6 1762 aa25.28■■□□□ 1.64
APTX-218ENST00000473270 CXCL9Q07325 125 aa25.27■■□□□ 1.64
APTX-218ENST00000473270 ANKRD13DQ6ZTN6 518 aa25.27■■□□□ 1.64
APTX-218ENST00000473270 PLBD2Q8NHP8 589 aa25.27■■□□□ 1.64
APTX-218ENST00000473270 HSP90B1P14625 803 aaKnown RBP25.26■■□□□ 1.63
APTX-218ENST00000473270 KIAA2012Q0VF49 1180 aa25.26■■□□□ 1.63
APTX-218ENST00000473270 FAM9BQ8IZU0 186 aa25.26■■□□□ 1.63
APTX-218ENST00000473270 HYPKQ9NX55 129 aa25.26■■□□□ 1.63
APTX-218ENST00000473270 CDHR2Q9BYE9 1310 aa25.26■■□□□ 1.63
APTX-218ENST00000473270 GMPSP49915 693 aaPredicted RBP25.25■■□□□ 1.63
APTX-218ENST00000473270 LBX1P52954 281 aa25.25■■□□□ 1.63
APTX-218ENST00000473270 COL4A5P29400 1685 aa25.25■■□□□ 1.63
APTX-218ENST00000473270 CAPNS2Q96L46 248 aa25.24■■□□□ 1.63
APTX-218ENST00000473270 H7C1D1 291 aa25.23■■□□□ 1.63
APTX-218ENST00000473270 RAD17O75943 681 aa25.23■■□□□ 1.63
APTX-218ENST00000473270 CALD1Q05682 793 aaKnown RBP25.23■■□□□ 1.63
APTX-218ENST00000473270 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
APTX-218ENST00000473270 WASHC4Q2M389 1173 aa25.22■■□□□ 1.63
APTX-218ENST00000473270 CFAP44Q96MT7 982 aa25.22■■□□□ 1.63
APTX-218ENST00000473270 GPR101Q96P66 508 aaPredicted RBP25.22■■□□□ 1.63
APTX-218ENST00000473270 CHMP4AQ9BY43 222 aa25.22■■□□□ 1.63
APTX-218ENST00000473270 ANKRD36CQ5JPF3 1778 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 TRAF5O00463 557 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 GOLGA2Q08379 1002 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 SLC51AQ86UW1 340 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 ZC3H15Q8WU90 426 aaKnown RBP25.21■■□□□ 1.63
APTX-218ENST00000473270 EYA3Q99504 573 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 NSFL1CQ9UNZ2 370 aaKnown RBP25.21■■□□□ 1.63
APTX-218ENST00000473270 TRIM35Q9UPQ4 493 aa25.21■■□□□ 1.63
APTX-218ENST00000473270 G3V3G9 751 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 C6orf229H3BNL8 230 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 CELF2O95319 508 aaKnown RBP25.2■■□□□ 1.62
APTX-218ENST00000473270 DCAF8Q5TAQ9 597 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 RIC3Q7Z5B4 369 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 ZNF428Q96B54 188 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 FAM89AQ96GI7 184 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 TLL2Q9Y6L7 1015 aa25.2■■□□□ 1.62
APTX-218ENST00000473270 ATP5J2-PTCD1G3V325 749 aa25.19■■□□□ 1.62
APTX-218ENST00000473270 DUSP27Q5VZP5 1158 aa25.19■■□□□ 1.62
APTX-218ENST00000473270 CYP4F22Q6NT55 531 aa25.19■■□□□ 1.62
APTX-218ENST00000473270 ZNF408Q9H9D4 720 aa25.19■■□□□ 1.62
APTX-218ENST00000473270 CNOT7Q9UIV1 285 aaKnown RBP25.19■■□□□ 1.62
APTX-218ENST00000473270 LTBP1Q14766 1721 aa25.18■■□□□ 1.62
APTX-218ENST00000473270 CDC37L1Q7L3B6 337 aa25.18■■□□□ 1.62
APTX-218ENST00000473270 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
APTX-218ENST00000473270 CST9Q5W186 159 aa25.17■■□□□ 1.62
APTX-218ENST00000473270 IRS4O14654 1257 aaPredicted RBP25.16■■□□□ 1.62
APTX-218ENST00000473270 HSPA8P11142 646 aaKnown RBP25.16■■□□□ 1.62
APTX-218ENST00000473270 MAP2K2P36507 400 aa25.16■■□□□ 1.62
APTX-218ENST00000473270 FMR1Q06787 632 aaKnown RBP eCLIP25.16■■□□□ 1.62
APTX-218ENST00000473270 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
APTX-218ENST00000473270 ISCA1Q9BUE6 129 aa25.16■■□□□ 1.62
APTX-218ENST00000473270 RIMBP2O15034 1052 aa25.15■■□□□ 1.62
APTX-218ENST00000473270 GNAI1P63096 354 aa25.15■■□□□ 1.62
APTX-218ENST00000473270 GLIS2Q9BZE0 524 aaPredicted RBP25.15■■□□□ 1.62
APTX-218ENST00000473270 MICALL2Q8IY33 904 aa25.14■■□□□ 1.62
APTX-218ENST00000473270 MBIPQ9NS73 344 aa25.14■■□□□ 1.62
APTX-218ENST00000473270 LAMB2P55268 1798 aa25.13■■□□□ 1.61
APTX-218ENST00000473270 CA12O43570 354 aa25.13■■□□□ 1.61
APTX-218ENST00000473270 DDX58O95786 925 aaKnown RBP25.13■■□□□ 1.61
APTX-218ENST00000473270 RPS8P62241 208 aaKnown RBP25.13■■□□□ 1.61
APTX-218ENST00000473270 TRIM28Q13263 835 aaKnown RBP25.13■■□□□ 1.61
APTX-218ENST00000473270 DPF2Q92785 391 aa25.13■■□□□ 1.61
APTX-218ENST00000473270 ZC3H12CQ9C0D7 883 aaKnown RBP25.13■■□□□ 1.61
APTX-218ENST00000473270 DBNDD1Q9H9R9 158 aa25.13■■□□□ 1.61
APTX-218ENST00000473270 PGAP2Q9UHJ9 254 aa25.13■■□□□ 1.61
APTX-218ENST00000473270 RPS12P25398 132 aaKnown RBP25.12■■□□□ 1.61
APTX-218ENST00000473270 SAPCD2Q86UD0 394 aa25.12■■□□□ 1.61
APTX-218ENST00000473270 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
APTX-218ENST00000473270 HHIPL1Q96JK4 782 aa25.12■■□□□ 1.61
APTX-218ENST00000473270 IFT57Q9NWB7 429 aa25.12■■□□□ 1.61
APTX-218ENST00000473270 ANKIB1Q9P2G1 1089 aa25.12■■□□□ 1.61
APTX-218ENST00000473270 TRPM7Q96QT4 1865 aa25.12■■□□□ 1.61
APTX-218ENST00000473270 APAF1O14727 1248 aa25.11■■□□□ 1.61
APTX-218ENST00000473270 CCDC152Q4G0S7 254 aa25.11■■□□□ 1.61
APTX-218ENST00000473270 ZBTB38Q8NAP3 1195 aaPredicted RBP25.11■■□□□ 1.61
APTX-218ENST00000473270 YDJCA8MPS7 323 aa25.1■■□□□ 1.61
APTX-218ENST00000473270 PSMD14O00487 310 aa25.1■■□□□ 1.61
APTX-218ENST00000473270 TRPM4Q8TD43 1214 aa25.1■■□□□ 1.61
APTX-218ENST00000473270 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
APTX-218ENST00000473270 ELL2O00472 640 aaPredicted RBP25.09■■□□□ 1.61
APTX-218ENST00000473270 ECE2O60344 883 aa25.09■■□□□ 1.61
APTX-218ENST00000473270 GPSM2P81274 684 aa25.09■■□□□ 1.61
APTX-218ENST00000473270 MYD88Q99836 296 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms