RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RGS9O75916 674 aaPredicted RBP9.89□□□□□ -0.83
CD46-213ENST00000471987 RARAP10276 462 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 TARSP26639 723 aaKnown RBP9.89□□□□□ -0.83
CD46-213ENST00000471987 ARID4AP29374 1257 aaPredicted RBP9.89□□□□□ -0.83
CD46-213ENST00000471987 GATA4P43694 442 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 C16orf46Q6P387 395 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 DHX32Q7L7V1 743 aaKnown RBP9.89□□□□□ -0.83
CD46-213ENST00000471987 FAM35AQ86V20 835 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 NUDT8Q8WV74 236 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 NACC1Q96RE7 527 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
CD46-213ENST00000471987 ZFATQ9P243 1243 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
CD46-213ENST00000471987 SASH3O75995 380 aa9.88□□□□□ -0.83
CD46-213ENST00000471987 EGFRP00533 1210 aa9.88□□□□□ -0.83
CD46-213ENST00000471987 FURINP09958 794 aa9.88□□□□□ -0.83
CD46-213ENST00000471987 BRD2P25440 801 aaKnown RBP9.88□□□□□ -0.83
CD46-213ENST00000471987 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
CD46-213ENST00000471987 RGL4Q8IZJ4 473 aa9.87□□□□□ -0.83
CD46-213ENST00000471987 TRPM4Q8TD43 1214 aa9.87□□□□□ -0.83
CD46-213ENST00000471987 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
CD46-213ENST00000471987 XYLBO75191 536 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 CPB1P15086 417 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 AFF1P51825 1210 aaKnown RBP9.86□□□□□ -0.83
CD46-213ENST00000471987 GPLD1P80108 840 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 CMTR1Q8N1G2 835 aaKnown RBP9.86□□□□□ -0.83
CD46-213ENST00000471987 MKNK1Q9BUB5 465 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 SAP130Q9H0E3 1048 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 FRRS1LQ9P0K9 344 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 USP20Q9Y2K6 914 aa9.86□□□□□ -0.83
CD46-213ENST00000471987 RAC1P63000 192 aa9.85□□□□□ -0.83
CD46-213ENST00000471987 ETFBKMTQ8IXQ9 262 aa9.85□□□□□ -0.83
CD46-213ENST00000471987 A0A0A0MRY4 1105 aa9.84□□□□□ -0.83
CD46-213ENST00000471987 ZBTB42B2RXF5 422 aa9.84□□□□□ -0.83
CD46-213ENST00000471987 ELNP15502 786 aa9.84□□□□□ -0.83
CD46-213ENST00000471987 NRLP54845 237 aa9.84□□□□□ -0.83
CD46-213ENST00000471987 GRIK4Q16099 956 aa9.84□□□□□ -0.83
CD46-213ENST00000471987 TLR7Q9NYK1 1049 aaKnown RBP9.84□□□□□ -0.83
CD46-213ENST00000471987 ARID3CA6NKF2 412 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.83□□□□□ -0.84
CD46-213ENST00000471987 DOC2BQ14184 412 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 PERM1Q5SV97 790 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 ELMSAN1Q6PJG2 1045 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 LPIN3Q9BQK8 851 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 FAM13BQ9NYF5 915 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 KCNMB2Q9Y691 235 aa9.83□□□□□ -0.84
CD46-213ENST00000471987 MLLT1Q03111 559 aaPredicted RBP9.82□□□□□ -0.84
CD46-213ENST00000471987 CAPN12Q6ZSI9 719 aa9.82□□□□□ -0.84
CD46-213ENST00000471987 C9orf172C9J069 976 aa9.81□□□□□ -0.84
CD46-213ENST00000471987 PSAPP07602 524 aa9.81□□□□□ -0.84
CD46-213ENST00000471987 PLAURQ03405 335 aa9.81□□□□□ -0.84
CD46-213ENST00000471987 NAA30Q147X3 362 aaPredicted RBP9.81□□□□□ -0.84
CD46-213ENST00000471987 MSL1Q68DK7 614 aa9.81□□□□□ -0.84
CD46-213ENST00000471987 DMRTC2Q8IXT2 367 aaPredicted RBP9.81□□□□□ -0.84
CD46-213ENST00000471987 TTC9Q92623 222 aa9.81□□□□□ -0.84
CD46-213ENST00000471987 TNFRSF10BO14763 440 aa9.8□□□□□ -0.84
CD46-213ENST00000471987 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
CD46-213ENST00000471987 EIF2AK2P19525 551 aaKnown RBP9.79□□□□□ -0.84
CD46-213ENST00000471987 ATP2B4P23634 1241 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 SOX18P35713 384 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 FMR1NBQ8N0W7 255 aaPredicted RBP9.79□□□□□ -0.84
CD46-213ENST00000471987 DTWD1Q8N5C7 304 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 KRTAP9-2Q9BYQ4 174 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 SMG9Q9H0W8 520 aaKnown RBP9.79□□□□□ -0.84
CD46-213ENST00000471987 STIM2Q9P246 746 aa9.79□□□□□ -0.84
CD46-213ENST00000471987 MMP20O60882 483 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 SELPP16109 830 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
CD46-213ENST00000471987 GRIK5Q16478 980 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 FAM26DQ5JW98 314 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 HFE2Q6ZVN8 426 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 WFDC8Q8IUA0 241 aa9.78□□□□□ -0.84
CD46-213ENST00000471987 LENG1Q96BZ8 264 aaPredicted RBP9.78□□□□□ -0.84
CD46-213ENST00000471987 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
CD46-213ENST00000471987 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
CD46-213ENST00000471987 ZAP70P43403 619 aa9.77□□□□□ -0.85
CD46-213ENST00000471987 SIK1P57059 783 aa9.77□□□□□ -0.85
CD46-213ENST00000471987 TRIP4Q15650 581 aaPredicted RBP9.77□□□□□ -0.85
CD46-213ENST00000471987 ABTB2Q8N961 1025 aa9.77□□□□□ -0.85
CD46-213ENST00000471987 FNDC3AQ9Y2H6 1198 aaKnown RBP9.77□□□□□ -0.85
CD46-213ENST00000471987 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 ADGRE1Q14246 886 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 SEMA6BQ9H3T3 888 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 TPSG1Q9NRR2 321 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 SLAIN2Q9P270 581 aa9.76□□□□□ -0.85
CD46-213ENST00000471987 GHRHP01286 108 aa9.75□□□□□ -0.85
CD46-213ENST00000471987 MBTPS1Q14703 1052 aa9.75□□□□□ -0.85
CD46-213ENST00000471987 CCDC82Q8N4S0 544 aa9.75□□□□□ -0.85
CD46-213ENST00000471987 PLD4Q96BZ4 506 aa9.75□□□□□ -0.85
CD46-213ENST00000471987 NSUN5Q96P11 429 aaKnown RBP9.75□□□□□ -0.85
CD46-213ENST00000471987 KRTAP9-6A0A140TA67 174 aa9.74□□□□□ -0.85
CD46-213ENST00000471987 J3QW42 95 aa9.74□□□□□ -0.85
CD46-213ENST00000471987 RSPO4Q2I0M5 234 aaPredicted RBP9.74□□□□□ -0.85
CD46-213ENST00000471987 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
CD46-213ENST00000471987 FBXO11Q86XK2 927 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms