RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 CASP7P55210 303 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 MTX1Q13505 466 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 HLFQ16534 295 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 HDAC5Q9UQL6 1122 aa12.3□□□□□ -0.44
CLK2-204ENST00000471047 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
CLK2-204ENST00000471047 SCN7AQ01118 1682 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 A0A087WZG4 1122 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 H7C1W4 665 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 TM4SF1P30408 202 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 NPM2Q86SE8 214 aaKnown RBP12.29□□□□□ -0.44
CLK2-204ENST00000471047 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 PRDM10Q9NQV6 1147 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
CLK2-204ENST00000471047 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
CLK2-204ENST00000471047 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 POLA2Q14181 598 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 DCTPP1Q9H773 170 aa12.28□□□□□ -0.44
CLK2-204ENST00000471047 HMMRO75330 724 aa12.27□□□□□ -0.45
CLK2-204ENST00000471047 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
CLK2-204ENST00000471047 CLEC4GQ6UXB4 293 aa12.27□□□□□ -0.45
CLK2-204ENST00000471047 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
CLK2-204ENST00000471047 CNTNAP1P78357 1384 aa12.27□□□□□ -0.45
CLK2-204ENST00000471047 PCCAP05165 728 aaPredicted RBP12.26□□□□□ -0.45
CLK2-204ENST00000471047 CTCFP49711 727 aaPredicted RBP12.26□□□□□ -0.45
CLK2-204ENST00000471047 NUCB1Q02818 461 aa12.26□□□□□ -0.45
CLK2-204ENST00000471047 NFIXQ14938 502 aa12.26□□□□□ -0.45
CLK2-204ENST00000471047 USPL1Q5W0Q7 1092 aa12.26□□□□□ -0.45
CLK2-204ENST00000471047 TTLL6Q8N841 843 aa12.26□□□□□ -0.45
CLK2-204ENST00000471047 BICC1Q9H694 974 aaKnown RBP12.26□□□□□ -0.45
CLK2-204ENST00000471047 PDZRN3Q9UPQ7 1066 aa12.26□□□□□ -0.45
CLK2-204ENST00000471047 VEGFBP49765 207 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 LBX1P52954 281 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 RABL6Q3YEC7 729 aaPredicted RBP12.25□□□□□ -0.45
CLK2-204ENST00000471047 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 UBE3BQ7Z3V4 1068 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 PPP1R42Q7Z4L9 355 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 C2CD5Q86YS7 1000 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 ZBTB38Q8NAP3 1195 aaPredicted RBP12.25□□□□□ -0.45
CLK2-204ENST00000471047 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 NARFQ9UHQ1 456 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 UBN2Q6ZU65 1347 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 CARMIL3Q8ND23 1372 aa12.25□□□□□ -0.45
CLK2-204ENST00000471047 SRGAP3O43295 1099 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 ZPR1O75312 459 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 FOXO4P98177 505 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 PARP10Q53GL7 1025 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 TIAM2Q8IVF5 1701 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
CLK2-204ENST00000471047 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
CLK2-204ENST00000471047 SERPINB2P05120 415 aa12.23□□□□□ -0.45
CLK2-204ENST00000471047 GPTP24298 496 aa12.23□□□□□ -0.45
CLK2-204ENST00000471047 CHD1LQ86WJ1 897 aa12.23□□□□□ -0.45
CLK2-204ENST00000471047 JARID2Q92833 1246 aaPredicted RBP12.23□□□□□ -0.45
CLK2-204ENST00000471047 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
CLK2-204ENST00000471047 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
CLK2-204ENST00000471047 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
CLK2-204ENST00000471047 ERFEQ4G0M1 354 aa12.22□□□□□ -0.45
CLK2-204ENST00000471047 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
CLK2-204ENST00000471047 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
CLK2-204ENST00000471047 LAMB2P55268 1798 aa12.22□□□□□ -0.45
CLK2-204ENST00000471047 H0YIN7 160 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 C21orf2O43822 256 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.45
CLK2-204ENST00000471047 PDE4AP27815 886 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 ANKRD45Q5TZF3 282 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 SUSD4Q5VX71 490 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
CLK2-204ENST00000471047 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLK2-204ENST00000471047 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
CLK2-204ENST00000471047 MYH3P11055 1940 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 RAB11FIP3O75154 756 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 NTSR2O95665 410 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 CSF1RP07333 972 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
CLK2-204ENST00000471047 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
CLK2-204ENST00000471047 LMBR1LQ6UX01 489 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
CLK2-204ENST00000471047 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
CLK2-204ENST00000471047 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
CLK2-204ENST00000471047 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.466e-7■■□□□ 13.8
CLK2-204ENST00000471047 UTP14AQ9BVJ6 771 aaKnown RBP12.19□□□□□ -0.46
CLK2-204ENST00000471047 LNPKQ9C0E8 428 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms