RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-208ENST00000470980 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
GREB1-208ENST00000470980 RNF39Q9H2S5 420 aa11.49□□□□□ -0.57
GREB1-208ENST00000470980 KIF3CO14782 793 aa11.48□□□□□ -0.57
GREB1-208ENST00000470980 RFC4P35249 363 aa11.48□□□□□ -0.57
GREB1-208ENST00000470980 CASP7P55210 303 aa11.48□□□□□ -0.57
GREB1-208ENST00000470980 C8orf34Q49A92 452 aa11.48□□□□□ -0.57
GREB1-208ENST00000470980 USP42Q9H9J4 1324 aaKnown RBP11.48□□□□□ -0.57
GREB1-208ENST00000470980 COL15A1P39059 1388 aa11.48□□□□□ -0.57
GREB1-208ENST00000470980 HSPA6P17066 643 aa11.47□□□□□ -0.57
GREB1-208ENST00000470980 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
GREB1-208ENST00000470980 PLEKHM2Q8IWE5 1019 aa11.47□□□□□ -0.57
GREB1-208ENST00000470980 OTUD7AQ8TE49 926 aaPredicted RBP11.47□□□□□ -0.57
GREB1-208ENST00000470980 KIF1BPQ96EK5 621 aa11.47□□□□□ -0.57
GREB1-208ENST00000470980 NOP58Q9Y2X3 529 aaKnown RBP11.47□□□□□ -0.57
GREB1-208ENST00000470980 CHMP3Q9Y3E7 222 aa11.47□□□□□ -0.57
GREB1-208ENST00000470980 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 A0A0G2JLW4 131 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 PCCAP05165 728 aaPredicted RBP11.46□□□□□ -0.57
GREB1-208ENST00000470980 DPEP1P16444 411 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 TM4SF1P30408 202 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 FOXO4P98177 505 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 G3BP1Q13283 466 aaKnown RBP eCLIP11.46□□□□□ -0.57
GREB1-208ENST00000470980 RABL6Q3YEC7 729 aaPredicted RBP11.46□□□□□ -0.57
GREB1-208ENST00000470980 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 ERC1Q8IUD2 1116 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 PA2G4Q9UQ80 394 aaKnown RBP11.46□□□□□ -0.57
GREB1-208ENST00000470980 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
GREB1-208ENST00000470980 CAMTA2O94983 1202 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 DDR1Q08345 913 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 BMP2KLQ5H9B9 411 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 ZBTB38Q8NAP3 1195 aaPredicted RBP11.45□□□□□ -0.58
GREB1-208ENST00000470980 FAM89AQ96GI7 184 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 IL1RAPL2Q9NP60 686 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 ZNF652Q9Y2D9 606 aa11.45□□□□□ -0.58
GREB1-208ENST00000470980 NRXN2Q9P2S2 1712 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 TTC22Q5TAA0 569 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 SIL1Q9H173 461 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 TRMT112Q9UI30 125 aaKnown RBP11.44□□□□□ -0.58
GREB1-208ENST00000470980 BCS1LQ9Y276 419 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
GREB1-208ENST00000470980 POLRMTO00411 1230 aaKnown RBP11.43□□□□□ -0.58
GREB1-208ENST00000470980 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
GREB1-208ENST00000470980 MX1P20591 662 aa11.43□□□□□ -0.58
GREB1-208ENST00000470980 PDE1AP54750 535 aa11.43□□□□□ -0.58
GREB1-208ENST00000470980 KLHDC4Q8TBB5 520 aa11.43□□□□□ -0.58
GREB1-208ENST00000470980 COPRSQ9NQ92 184 aa11.43□□□□□ -0.58
GREB1-208ENST00000470980 SRP68Q9UHB9 627 aaKnown RBP11.43□□□□□ -0.58
GREB1-208ENST00000470980 WWC3Q9ULE0 1092 aa11.43□□□□□ -0.58
GREB1-208ENST00000470980 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 FAM177BA6PVY3 158 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 IRS4O14654 1257 aaPredicted RBP11.42□□□□□ -0.58
GREB1-208ENST00000470980 RFX5P48382 616 aaPredicted RBP11.42□□□□□ -0.58
GREB1-208ENST00000470980 PARP10Q53GL7 1025 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 SYNE4Q8N205 404 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 CLASRPQ8N2M8 674 aaKnown RBP11.42□□□□□ -0.58
GREB1-208ENST00000470980 UTP14AQ9BVJ6 771 aaKnown RBP11.42□□□□□ -0.58
GREB1-208ENST00000470980 PLA2G12BQ9BX93 195 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 OSBPL3Q9H4L5 887 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
GREB1-208ENST00000470980 NUP98P52948 1817 aa11.42□□□□□ -0.58
GREB1-208ENST00000470980 ZPR1O75312 459 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 TOMM70O94826 608 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 SASH1O94885 1247 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 IFIT2P09913 472 aaKnown RBP11.41□□□□□ -0.58
GREB1-208ENST00000470980 GSPT1P15170 499 aaKnown RBP11.41□□□□□ -0.58
GREB1-208ENST00000470980 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
GREB1-208ENST00000470980 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 SUSD4Q5VX71 490 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 TSHZ3Q63HK5 1081 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 CLEC4GQ6UXB4 293 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 ZNF526Q8TF50 670 aaPredicted RBP11.41□□□□□ -0.58
GREB1-208ENST00000470980 GPATCH3Q96I76 525 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 STAP2Q9UGK3 403 aa11.41□□□□□ -0.58
GREB1-208ENST00000470980 AOX1Q06278 1338 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 SALL3Q9BXA9 1300 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 RGL2O15211 777 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 CDC45O75419 566 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 ANP32AP39687 249 aaKnown RBP11.4□□□□□ -0.58
GREB1-208ENST00000470980 CTSWP56202 376 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 AACSQ86V21 672 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
GREB1-208ENST00000470980 UPF2Q9HAU5 1272 aaKnown RBP11.4□□□□□ -0.58
GREB1-208ENST00000470980 BCL2L12Q9HB09 334 aa11.4□□□□□ -0.58
GREB1-208ENST00000470980 PDE8AO60658 829 aa11.39□□□□□ -0.59
GREB1-208ENST00000470980 SEC24BO95487 1268 aa11.39□□□□□ -0.59
GREB1-208ENST00000470980 CSF1RP07333 972 aa11.39□□□□□ -0.59
GREB1-208ENST00000470980 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
GREB1-208ENST00000470980 SDSP20132 328 aa11.39□□□□□ -0.59
GREB1-208ENST00000470980 IFIT5Q13325 482 aaKnown RBP11.39□□□□□ -0.59
GREB1-208ENST00000470980 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms