RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 CDCA7Q9BWT1 371 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-202ENST00000470357 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 PKD1L3Q7Z443 1732 aa8.6□□□□□ -1.03
VAMP3-202ENST00000470357 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
VAMP3-202ENST00000470357 FMNL1O95466 1100 aaPredicted RBP8.59□□□□□ -1.03
VAMP3-202ENST00000470357 ADH1BP00325 375 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 SLFN5Q08AF3 891 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 ZNF827Q17R98 1081 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
VAMP3-202ENST00000470357 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
VAMP3-202ENST00000470357 RRP7AQ9Y3A4 280 aaKnown RBP8.59□□□□□ -1.03
VAMP3-202ENST00000470357 GNAT3A8MTJ3 354 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 EXOC5O00471 708 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 S1PR4O95977 384 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
VAMP3-202ENST00000470357 GNAI1P63096 354 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 TRMT2AQ8IZ69 625 aaKnown RBP8.58□□□□□ -1.04
VAMP3-202ENST00000470357 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 SPG7Q9UQ90 795 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 WNK3Q9BYP7 1800 aa8.58□□□□□ -1.04
VAMP3-202ENST00000470357 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-202ENST00000470357 CT47B1P0C2W7 299 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-202ENST00000470357 FDX1P10109 184 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 GPR162Q16538 588 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
VAMP3-202ENST00000470357 Q3C1V9 767 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
VAMP3-202ENST00000470357 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
VAMP3-202ENST00000470357 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 IFT57Q9NWB7 429 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 PCDHGC3Q9UN70 934 aa8.57□□□□□ -1.04
VAMP3-202ENST00000470357 SCN11AQ9UI33 1791 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 NEFLP07196 543 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 HSP90AB1P08238 724 aaKnown RBP8.56□□□□□ -1.04
VAMP3-202ENST00000470357 GGCXP38435 758 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 DIXDC1Q155Q3 683 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 AKAP4Q5JQC9 854 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 BABAM1Q9NWV8 329 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 COL24A1Q17RW2 1714 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 ADAMTS7Q9UKP4 1686 aa8.56□□□□□ -1.04
VAMP3-202ENST00000470357 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 TNS2Q63HR2 1409 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 IL2RBP14784 551 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 ZNF530Q6P9A1 599 aaPredicted RBP8.55□□□□□ -1.04
VAMP3-202ENST00000470357 NLGN2Q8NFZ4 835 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 ZNF428Q96B54 188 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 ACSBG1Q96GR2 724 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 RCAN3Q9UKA8 241 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 NHSQ6T4R5 1651 aa8.55□□□□□ -1.04
VAMP3-202ENST00000470357 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
VAMP3-202ENST00000470357 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 SLC16A10Q8TF71 515 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 CHMP4AQ9BY43 222 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 MEGF6O75095 1541 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 PCDH11XQ9BZA7 1347 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 PCDH11YQ9BZA8 1340 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 FANCIQ9NVI1 1328 aa8.54□□□□□ -1.04
VAMP3-202ENST00000470357 SIPA1L3O60292 1781 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 CEMIPQ8WUJ3 1361 aa8.53□□□□□ -1.04
VAMP3-202ENST00000470357 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
VAMP3-202ENST00000470357 ZNF853P0CG23 659 aa8.53□□□□□ -1.04
VAMP3-202ENST00000470357 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 MYSM1Q5VVJ2 828 aa8.53□□□□□ -1.04
VAMP3-202ENST00000470357 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 ZCRB1Q8TBF4 217 aaKnown RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 PCDHB15Q9Y5E8 787 aa8.53□□□□□ -1.04
VAMP3-202ENST00000470357 SOS1Q07889 1333 aaPredicted RBP8.53□□□□□ -1.04
VAMP3-202ENST00000470357 SPTLC1O15269 473 aa8.52□□□□□ -1.05
VAMP3-202ENST00000470357 TEFQ10587 303 aa8.52□□□□□ -1.05
VAMP3-202ENST00000470357 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
VAMP3-202ENST00000470357 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
VAMP3-202ENST00000470357 LAS1LQ9Y4W2 734 aaKnown RBP8.52□□□□□ -1.05
VAMP3-202ENST00000470357 KDM3BQ7LBC6 1761 aa8.52□□□□□ -1.05
VAMP3-202ENST00000470357 CHL1O00533 1208 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 RGS20O76081 388 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 PHKG2P15735 406 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 TAF7Q15545 349 aaPredicted RBP8.51□□□□□ -1.05
VAMP3-202ENST00000470357 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 MCM10Q7L590 875 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 DCAF5Q96JK2 942 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 LIMD1Q9UGP4 676 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 SUPT16HQ9Y5B9 1047 aaKnown RBP8.51□□□□□ -1.05
VAMP3-202ENST00000470357 BTAF1O14981 1849 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 RNF123Q5XPI4 1314 aa8.51□□□□□ -1.05
VAMP3-202ENST00000470357 RNMTO43148 476 aaKnown RBP8.5□□□□□ -1.05
VAMP3-202ENST00000470357 GRIN3BO60391 1043 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms