RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 DDX19BQ9UMR2 479 aa15.86■□□□□ 0.13
SPTLC1-204ENST00000469778 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
SPTLC1-204ENST00000469778 RRP1P56182 461 aaKnown RBP15.84■□□□□ 0.13
SPTLC1-204ENST00000469778 RABL6Q3YEC7 729 aaPredicted RBP15.84■□□□□ 0.13
SPTLC1-204ENST00000469778 CDC5LQ99459 802 aaKnown RBP15.84■□□□□ 0.13
SPTLC1-204ENST00000469778 ZBTB7BO15156 539 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 GNAI2P04899 355 aa15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 FOXO4P98177 505 aa15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 GRAPQ13588 217 aa15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 AAMPQ13685 434 aa15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 MVPQ14764 893 aaKnown RBP15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 GRAPLQ8TC17 118 aaPredicted RBP15.83■□□□□ 0.12
SPTLC1-204ENST00000469778 PLIN1O60240 522 aa15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 RLBP1P12271 317 aa15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 RPS8P62241 208 aaKnown RBP15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 IFIT5Q13325 482 aaKnown RBP15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 C3orf67Q6ZVT6 689 aa15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 PANK1Q8TE04 598 aa15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 ANKRD31Q8N7Z5 1873 aa15.82■□□□□ 0.12
SPTLC1-204ENST00000469778 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 CENPBP07199 599 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 GPR162Q16538 588 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 CCDC57Q2TAC2 916 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 LMBR1LQ6UX01 489 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 N4BP2Q86UW6 1770 aaPredicted RBP15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 SP8Q8IXZ3 490 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 BCS1LQ9Y276 419 aa15.81■□□□□ 0.12
SPTLC1-204ENST00000469778 ANKRD18AQ8IVF6 992 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 RTKN2Q8IZC4 609 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 KAZALD1Q96I82 304 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 SUCLG2Q96I99 432 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 MEIS3Q99687 375 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 ATP6V0A2Q9Y487 856 aa15.8■□□□□ 0.12
SPTLC1-204ENST00000469778 IGHMBP2P38935 993 aaKnown RBP15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 MTX1Q13505 466 aa15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 BICC1Q9H694 974 aaKnown RBP15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 GREM2Q9H772 168 aa15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 BSDC1Q9NW68 430 aaPredicted RBP15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 FBXO3Q9UK99 471 aa15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 LAMB2P55268 1798 aa15.79■□□□□ 0.12
SPTLC1-204ENST00000469778 DLEC1Q9Y238 1755 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 DDX60Q8IY21 1712 aaKnown RBP15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 KIAA1551Q9HCM1 1747 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 PPEF1O14829 653 aaPredicted RBP15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 ITGA6P23229 1130 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 EPHA10Q5JZY3 1008 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 COG6Q9Y2V7 657 aa15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
SPTLC1-204ENST00000469778 CCDC93Q567U6 631 aa15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 ANKRD44Q8N8A2 993 aa15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 MPHOSPH8Q99549 860 aa15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 VPS33BQ9H267 617 aa15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 CHMP3Q9Y3E7 222 aa15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 SUPT16HQ9Y5B9 1047 aaKnown RBP15.77■□□□□ 0.12
SPTLC1-204ENST00000469778 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 RPAP2Q8IXW5 612 aaPredicted RBP15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 CELF1Q92879 486 aaKnown RBP15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 TNRC6CQ9HCJ0 1690 aaKnown RBP15.76■□□□□ 0.11
SPTLC1-204ENST00000469778 LTBP3Q9NS15 1303 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 C21orf2O43822 256 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 C20orf194Q5TEA3 1177 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 PELP1Q8IZL8 1130 aaKnown RBP15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 SUPT20HQ8NEM7 779 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 PSMD1Q99460 953 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 ANKRD2Q9GZV1 360 aa15.75■□□□□ 0.11
SPTLC1-204ENST00000469778 MYH3P11055 1940 aa15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 BRCA1P38398 1863 aaKnown RBP15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 YBX3P16989 372 aaKnown RBP eCLIP15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 ATP8B2P98198 1209 aa15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 LDHAL6AQ6ZMR3 332 aa15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 COPRSQ9NQ92 184 aa15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
SPTLC1-204ENST00000469778 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
SPTLC1-204ENST00000469778 HMMRO75330 724 aa15.73■□□□□ 0.11
SPTLC1-204ENST00000469778 MPNDQ8N594 471 aa15.73■□□□□ 0.11
SPTLC1-204ENST00000469778 PODXL2Q9NZ53 605 aa15.73■□□□□ 0.11
SPTLC1-204ENST00000469778 CIAO1O76071 339 aa15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 SSH3Q8TE77 659 aa15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 RTFDC1Q9BY42 306 aaPredicted RBP15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 TAOK3Q9H2K8 898 aa15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 MINPP1Q9UNW1 487 aa15.72■□□□□ 0.11
SPTLC1-204ENST00000469778 MROH5Q6ZUA9 1318 aa15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 SLX4Q8IY92 1834 aa15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 ARFGEF1Q9Y6D6 1849 aa15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 RFX5P48382 616 aaPredicted RBP15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 FKBP4Q02790 459 aaKnown RBP eCLIP15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 LEMD3Q9Y2U8 911 aa15.71■□□□□ 0.11
SPTLC1-204ENST00000469778 XDHP47989 1333 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms