RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 MIER1Q8N108 512 aa28.56■■■□□ 2.16
CDK5-202ENST00000469108 IARSP41252 1262 aaKnown RBP28.55■■■□□ 2.16
CDK5-202ENST00000469108 CWF19L2Q2TBE0 894 aaKnown RBP28.55■■■□□ 2.16
CDK5-202ENST00000469108 TMX4Q9H1E5 349 aaPredicted RBP28.55■■■□□ 2.16
CDK5-202ENST00000469108 CDHR2Q9BYE9 1310 aa28.54■■■□□ 2.16
CDK5-202ENST00000469108 NEURL1BA8MQ27 555 aa28.54■■■□□ 2.16
CDK5-202ENST00000469108 SP8Q8IXZ3 490 aa28.54■■■□□ 2.16
CDK5-202ENST00000469108 DNAAF4Q8WXU2 420 aa28.54■■■□□ 2.16
CDK5-202ENST00000469108 RRAGCQ9HB90 399 aa28.54■■■□□ 2.16
CDK5-202ENST00000469108 DPY19L2Q6NUT2 758 aa28.53■■■□□ 2.16
CDK5-202ENST00000469108 JARID2Q92833 1246 aaPredicted RBP28.53■■■□□ 2.16
CDK5-202ENST00000469108 COL4A5P29400 1685 aa28.53■■■□□ 2.16
CDK5-202ENST00000469108 TMC4Q7Z404 712 aa28.52■■■□□ 2.16
CDK5-202ENST00000469108 PDE8AO60658 829 aa28.51■■■□□ 2.15
CDK5-202ENST00000469108 CELF1Q92879 486 aaKnown RBP28.51■■■□□ 2.15
CDK5-202ENST00000469108 CDCA7LQ96GN5 454 aa28.51■■■□□ 2.15
CDK5-202ENST00000469108 LTBP1Q14766 1721 aa28.51■■■□□ 2.15
CDK5-202ENST00000469108 SPEF2Q9C093 1822 aa28.5■■■□□ 2.15
CDK5-202ENST00000469108 DUOX1Q9NRD9 1551 aa28.5■■■□□ 2.15
CDK5-202ENST00000469108 TOMM70O94826 608 aa28.5■■■□□ 2.15
CDK5-202ENST00000469108 SCN4AP35499 1836 aa28.5■■■□□ 2.15
CDK5-202ENST00000469108 LINS1Q8NG48 757 aa28.49■■■□□ 2.15
CDK5-202ENST00000469108 GCKRQ14397 625 aa28.48■■■□□ 2.15
CDK5-202ENST00000469108 CCDC152Q4G0S7 254 aa28.48■■■□□ 2.15
CDK5-202ENST00000469108 TRMT2AQ8IZ69 625 aaKnown RBP28.48■■■□□ 2.15
CDK5-202ENST00000469108 RTFDC1Q9BY42 306 aaPredicted RBP28.48■■■□□ 2.15
CDK5-202ENST00000469108 H7C1W4 665 aa28.47■■■□□ 2.15
CDK5-202ENST00000469108 VEGFAP15692 232 aaPredicted RBP28.47■■■□□ 2.15
CDK5-202ENST00000469108 C16orf71Q8IYS4 520 aaPredicted RBP28.47■■■□□ 2.15
CDK5-202ENST00000469108 ZNF541Q9H0D2 1346 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 F6X3S4 739 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 FZD9O00144 591 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 DDNO94850 711 aaPredicted RBP28.46■■■□□ 2.15
CDK5-202ENST00000469108 DPP8Q6V1X1 898 aaPredicted RBP28.46■■■□□ 2.15
CDK5-202ENST00000469108 UBE3BQ7Z3V4 1068 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 MPNDQ8N594 471 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 JDP2Q8WYK2 163 aa28.46■■■□□ 2.15
CDK5-202ENST00000469108 POTECB2RU33 542 aa28.45■■■□□ 2.14
CDK5-202ENST00000469108 CTSWP56202 376 aa28.45■■■□□ 2.14
CDK5-202ENST00000469108 LARGE2Q8N3Y3 721 aa28.45■■■□□ 2.14
CDK5-202ENST00000469108 SUPT20HQ8NEM7 779 aa28.45■■■□□ 2.14
CDK5-202ENST00000469108 RBM46Q8TBY0 533 aaKnown RBP28.45■■■□□ 2.14
CDK5-202ENST00000469108 SEC31BQ9NQW1 1179 aa28.45■■■□□ 2.14
CDK5-202ENST00000469108 RPS8P62241 208 aaKnown RBP28.44■■■□□ 2.14
CDK5-202ENST00000469108 VPS33BQ9H267 617 aa28.44■■■□□ 2.14
CDK5-202ENST00000469108 BEND3Q5T5X7 828 aa28.43■■■□□ 2.14
CDK5-202ENST00000469108 MRPL50Q8N5N7 158 aaKnown RBP28.43■■■□□ 2.14
CDK5-202ENST00000469108 CCDC85AQ96PX6 553 aaPredicted RBP28.43■■■□□ 2.14
CDK5-202ENST00000469108 PPIP5K2O43314 1243 aa28.42■■■□□ 2.14
CDK5-202ENST00000469108 CASP7P55210 303 aa28.42■■■□□ 2.14
CDK5-202ENST00000469108 AOC3Q16853 763 aa28.42■■■□□ 2.14
CDK5-202ENST00000469108 RTL9Q8NET4 1388 aa28.41■■■□□ 2.14
CDK5-202ENST00000469108 TTLL11Q8NHH1 800 aa28.41■■■□□ 2.14
CDK5-202ENST00000469108 L3MBTL3Q96JM7 780 aaPredicted RBP28.41■■■□□ 2.14
CDK5-202ENST00000469108 SSH1Q8WYL5 1049 aa28.4■■■□□ 2.14
CDK5-202ENST00000469108 PLA2G12BQ9BX93 195 aa28.4■■■□□ 2.14
CDK5-202ENST00000469108 NIM1KQ8IY84 436 aa28.39■■■□□ 2.14
CDK5-202ENST00000469108 EIF6P56537 245 aaKnown RBP28.38■■■□□ 2.13
CDK5-202ENST00000469108 GPSM2P81274 684 aa28.38■■■□□ 2.13
CDK5-202ENST00000469108 KIAA2012Q0VF49 1180 aa28.38■■■□□ 2.13
CDK5-202ENST00000469108 GPC2Q8N158 579 aa28.38■■■□□ 2.13
CDK5-202ENST00000469108 GREM2Q9H772 168 aa28.38■■■□□ 2.13
CDK5-202ENST00000469108 NSFL1CQ9UNZ2 370 aaKnown RBP28.38■■■□□ 2.13
CDK5-202ENST00000469108 HSPA6P17066 643 aa28.37■■■□□ 2.13
CDK5-202ENST00000469108 ALDH1L2Q3SY69 923 aa28.37■■■□□ 2.13
CDK5-202ENST00000469108 PTPRCP08575 1304 aa28.37■■■□□ 2.13
CDK5-202ENST00000469108 IQCA1LA6NCM1 817 aa28.36■■■□□ 2.13
CDK5-202ENST00000469108 CT47B1P0C2W7 299 aaPredicted RBP28.36■■■□□ 2.13
CDK5-202ENST00000469108 FSTL1Q12841 308 aa28.36■■■□□ 2.13
CDK5-202ENST00000469108 SLC4A10Q6U841 1118 aa28.36■■■□□ 2.13
CDK5-202ENST00000469108 ANKRD18AQ8IVF6 992 aa28.36■■■□□ 2.13
CDK5-202ENST00000469108 CDC5LQ99459 802 aaKnown RBP28.36■■■□□ 2.13
CDK5-202ENST00000469108 ALDH1L1O75891 902 aa28.35■■■□□ 2.13
CDK5-202ENST00000469108 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
CDK5-202ENST00000469108 SMC1BQ8NDV3 1235 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 SRCIN1Q9C0H9 1055 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 PODXL2Q9NZ53 605 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 POLLQ9UGP5 575 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 ZNRF3Q9ULT6 936 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 CEP350Q5VT06 3117 aa28.34■■■□□ 2.13
CDK5-202ENST00000469108 ADAMTSL1Q8N6G6 1762 aa28.33■■■□□ 2.13
CDK5-202ENST00000469108 GRM8O00222 908 aa28.33■■■□□ 2.13
CDK5-202ENST00000469108 CSF1RP07333 972 aa28.32■■■□□ 2.12
CDK5-202ENST00000469108 TBC1D16Q8TBP0 767 aa28.32■■■□□ 2.12
CDK5-202ENST00000469108 SMC4Q9NTJ3 1288 aa28.32■■■□□ 2.12
CDK5-202ENST00000469108 GJA3Q9Y6H8 435 aa28.32■■■□□ 2.12
CDK5-202ENST00000469108 A0A1B0GUL6 1792 aa28.32■■■□□ 2.12
CDK5-202ENST00000469108 C6orf229H3BNL8 230 aa28.31■■■□□ 2.12
CDK5-202ENST00000469108 WASHC4Q2M389 1173 aa28.31■■■□□ 2.12
CDK5-202ENST00000469108 FAM161AQ3B820 660 aa28.31■■■□□ 2.12
CDK5-202ENST00000469108 ANKIB1Q9P2G1 1089 aa28.31■■■□□ 2.12
CDK5-202ENST00000469108 HACL1Q9UJ83 578 aa28.31■■■□□ 2.12
CDK5-202ENST00000469108 FOXO4P98177 505 aa28.3■■■□□ 2.12
CDK5-202ENST00000469108 HNRNPUQ00839 825 aaKnown RBP eCLIP28.3■■■□□ 2.12
CDK5-202ENST00000469108 TAF1DQ9H5J8 278 aaPredicted RBP28.3■■■□□ 2.12
CDK5-202ENST00000469108 BSDC1Q9NW68 430 aaPredicted RBP28.3■■■□□ 2.12
CDK5-202ENST00000469108 ITGA6P23229 1130 aa28.29■■■□□ 2.12
CDK5-202ENST00000469108 EYA3Q99504 573 aa28.29■■■□□ 2.12
CDK5-202ENST00000469108 C9orf78Q9NZ63 289 aaPredicted RBP28.29■■■□□ 2.12
CDK5-202ENST00000469108 XDHP47989 1333 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms