RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 BCL2L13Q9BXK5 485 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 SRCIN1Q9C0H9 1055 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 TAOK3Q9H2K8 898 aa18.76■□□□□ 0.59
TMEM39A-205ENST00000468676 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
TMEM39A-205ENST00000468676 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
TMEM39A-205ENST00000468676 RASSF7Q02833 373 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 JARID2Q92833 1246 aaPredicted RBP18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 PLA2G12BQ9BX93 195 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 RNF181Q9P0P0 153 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 ATP6V0A2Q9Y487 856 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 MYH3P11055 1940 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
TMEM39A-205ENST00000468676 CTSWP56202 376 aa18.73■□□□□ 0.59
TMEM39A-205ENST00000468676 FKBP4Q02790 459 aaKnown RBP eCLIP18.73■□□□□ 0.59
TMEM39A-205ENST00000468676 SP8Q8IXZ3 490 aa18.73■□□□□ 0.59
TMEM39A-205ENST00000468676 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
TMEM39A-205ENST00000468676 GRM8O00222 908 aa18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 CASP7P55210 303 aa18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 ZNF784Q8NCA9 323 aaPredicted RBP18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 ARHGAP45Q92619 1136 aa18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 PSMD1Q99460 953 aa18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 API5Q9BZZ5 524 aaKnown RBP18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
TMEM39A-205ENST00000468676 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
TMEM39A-205ENST00000468676 RPS8P62241 208 aaKnown RBP18.71■□□□□ 0.59
TMEM39A-205ENST00000468676 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
TMEM39A-205ENST00000468676 NOB1Q9ULX3 412 aaKnown RBP18.71■□□□□ 0.59
TMEM39A-205ENST00000468676 DICER1Q9UPY3 1922 aaKnown RBP18.7■□□□□ 0.58
TMEM39A-205ENST00000468676 RTL9Q8NET4 1388 aa18.7■□□□□ 0.58
TMEM39A-205ENST00000468676 TAF1P21675 1872 aa18.7■□□□□ 0.58
TMEM39A-205ENST00000468676 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
TMEM39A-205ENST00000468676 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
TMEM39A-205ENST00000468676 CDC5LQ99459 802 aaKnown RBP18.69■□□□□ 0.58
TMEM39A-205ENST00000468676 SNED1Q8TER0 1413 aa18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 CSF1RP07333 972 aa18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 PRELPP51888 382 aa18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 SUPT20HQ8NEM7 779 aa18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 CELF1Q92879 486 aaKnown RBP18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
TMEM39A-205ENST00000468676 DPP8Q6V1X1 898 aaPredicted RBP18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 MPNDQ8N594 471 aa18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 SEC31BQ9NQW1 1179 aa18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 ZNF277Q9NRM2 450 aaPredicted RBP18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 UTYO14607 1347 aa18.67■□□□□ 0.58
TMEM39A-205ENST00000468676 IARSP41252 1262 aaKnown RBP18.66■□□□□ 0.58
TMEM39A-205ENST00000468676 CCDC85AQ96PX6 553 aaPredicted RBP18.66■□□□□ 0.58
TMEM39A-205ENST00000468676 RTFDC1Q9BY42 306 aaPredicted RBP18.66■□□□□ 0.58
TMEM39A-205ENST00000468676 GREM2Q9H772 168 aa18.66■□□□□ 0.58
TMEM39A-205ENST00000468676 GPBP1L1Q9HC44 474 aaPredicted RBP18.66■□□□□ 0.58
TMEM39A-205ENST00000468676 BCAR3O75815 825 aa18.65■□□□□ 0.58
TMEM39A-205ENST00000468676 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
TMEM39A-205ENST00000468676 LRRC37AA6NMS7 1700 aa18.65■□□□□ 0.58
TMEM39A-205ENST00000468676 FOXO4P98177 505 aa18.64■□□□□ 0.57
TMEM39A-205ENST00000468676 DPY19L2Q6NUT2 758 aa18.64■□□□□ 0.57
TMEM39A-205ENST00000468676 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
TMEM39A-205ENST00000468676 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 NBPF7P0C2Y1 421 aaPredicted RBP18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 ITGA6P23229 1130 aa18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 IGHMBP2P38935 993 aaKnown RBP18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 USP44Q9H0E7 712 aa18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
TMEM39A-205ENST00000468676 ANKRD18BA2A2Z9 1011 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 LMBR1LQ6UX01 489 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 LARGE2Q8N3Y3 721 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 ZNF526Q8TF50 670 aaPredicted RBP18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 PODXL2Q9NZ53 605 aa18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 NSFL1CQ9UNZ2 370 aaKnown RBP18.62■□□□□ 0.57
TMEM39A-205ENST00000468676 CCDC57Q2TAC2 916 aa18.61■□□□□ 0.57
TMEM39A-205ENST00000468676 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
TMEM39A-205ENST00000468676 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
TMEM39A-205ENST00000468676 CHMP3Q9Y3E7 222 aa18.61■□□□□ 0.57
TMEM39A-205ENST00000468676 PPIP5K2O43314 1243 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 TRIM27P14373 513 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 GPSM2P81274 684 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 SUCLG2Q96I99 432 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 MPHOSPH8Q99549 860 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 ANKIB1Q9P2G1 1089 aa18.6■□□□□ 0.57
TMEM39A-205ENST00000468676 FZD9O00144 591 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 KIAA2012Q0VF49 1180 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 EPHA10Q5JZY3 1008 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 SLC51AQ86UW1 340 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 NIM1KQ8IY84 436 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 EYA3Q99504 573 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 COL4A1P02462 1669 aa18.59■□□□□ 0.57
TMEM39A-205ENST00000468676 XDHP47989 1333 aa18.58■□□□□ 0.57
TMEM39A-205ENST00000468676 C6orf229H3BNL8 230 aa18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 UBTFL1P0CB47 393 aaPredicted RBP18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 AOC3Q16853 763 aa18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 WASHC4Q2M389 1173 aa18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 RABL6Q3YEC7 729 aaPredicted RBP18.58■□□□□ 0.56
TMEM39A-205ENST00000468676 KAZALD1Q96I82 304 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms