RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZNF438Q7Z4V0 828 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 ITPKCQ96DU7 683 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 CNTNAP3BQ96NU0 1288 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 CFHR5Q9BXR6 569 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 CNTNAP3Q9BZ76 1288 aa5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 DDX41Q9UJV9 622 aaKnown RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 TMA7Q9Y2S6 64 aaKnown RBP5.48□□□□□ -1.53
HMGB1P25-201ENST00000468402 ANKRD62A6NC57 917 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 UBAP1LF5GYI3 381 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 GIPC1O14908 333 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 PHACTR2O75167 634 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 STK10O94804 968 aaKnown RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 IRS1P35568 1242 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 TAF1CQ15572 869 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 CCDC144BQ3MJ40 725 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 USPL1Q5W0Q7 1092 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 POTEAQ6S8J7 498 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 PI16Q6UXB8 463 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 NOP9Q86U38 636 aaKnown RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 KDF1Q8NAX2 398 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 CCDC74AQ96AQ1 378 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 C12orf49Q9H741 205 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 ZSWIM4Q9H7M6 989 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 CUEDC1Q9NWM3 386 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 FOXD3Q9UJU5 478 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 USP20Q9Y2K6 914 aa5.47□□□□□ -1.53
HMGB1P25-201ENST00000468402 CDC14CA4D256 554 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 TGFBR3LH3BV60 316 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 TNFRSF21O75509 655 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 POLR3DP05423 398 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 IDH3AP50213 366 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 RACK1P63244 317 aaKnown RBP5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 ARSJQ5FYB0 599 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 MEI1Q5TIA1 1274 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 SUSD3Q96L08 255 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 HIRIP3Q9BW71 556 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZFAND3Q9H8U3 227 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 PPP4R2Q9NY27 417 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 ANKIB1Q9P2G1 1089 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 BCS1LQ9Y276 419 aa5.46□□□□□ -1.54
HMGB1P25-201ENST00000468402 CADPSQ9ULU8 1353 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 PPFIA3O75145 1194 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 USP17L7P0C7H9 530 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 ARSDP51689 593 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 C4orf17Q53FE4 359 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 SOGA3Q5TF21 947 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 Q6ZVU0 165 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZNF280CQ8ND82 737 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 SNX29Q8TEQ0 813 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 HSH2DQ96JZ2 352 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 OSBPL7Q9BZF2 842 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 ELP3Q9H9T3 547 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 POLMQ9NP87 494 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 FAM8A1Q9UBU6 413 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 ADAMTS8Q9UP79 889 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 RTCBQ9Y3I0 505 aaKnown RBP5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 GJA3Q9Y6H8 435 aa5.45□□□□□ -1.54
HMGB1P25-201ENST00000468402 TIMP2P16035 220 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 MAP3K10Q02779 954 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 NBPF10Q6P3W6 841 aaKnown RBP5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 NXPE4Q6UWF7 544 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZNF295-AS1Q8N0V1 137 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 GALNT6Q8NCL4 622 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 ARMC5Q96C12 935 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 INSM2Q96T92 566 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 GMLQ99445 158 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZFYVE28Q9HCC9 887 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 NPHS2Q9NP85 383 aa5.44□□□□□ -1.54
HMGB1P25-201ENST00000468402 EPB42P16452 691 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 PAK2Q13177 524 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 PDE12Q6L8Q7 609 aaKnown RBP5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 LRRC69Q6ZNQ3 347 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 ANKRD13AQ8IZ07 590 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 BCO2Q9BYV7 579 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 GRIP2Q9C0E4 1043 aa5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 SRA1Q9HD15 236 aaKnown RBP5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 TTF2Q9UNY4 1162 aaKnown RBP5.43□□□□□ -1.54
HMGB1P25-201ENST00000468402 USP31Q70CQ4 1352 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 TLDC2A0PJX2 215 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 GPC1P35052 558 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 POU4F2Q12837 409 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 PRICKLE2Q7Z3G6 844 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 BTLAQ7Z6A9 289 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 RELL1Q8IUW5 271 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 LINC00528Q8N1L1 170 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 GPRASP2Q96D09 838 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 CEP63Q96MT8 703 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 SRCIN1Q9C0H9 1055 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 ZDHHC3Q9NYG2 299 aa5.42□□□□□ -1.54
HMGB1P25-201ENST00000468402 FIGNL2A6NMB9 653 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 MINDY4BA8MYZ0 360 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 XYLBO75191 536 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 IGHA1P01876 353 aa5.41□□□□□ -1.54
HMGB1P25-201ENST00000468402 CES1P23141 567 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms