RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
NUP188-204ENST00000467044 C3orf67Q6ZVT6 689 aa13.38□□□□□ -0.27
NUP188-204ENST00000467044 LAMB2P55268 1798 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 NRXN2Q9P2S2 1712 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 IGHDP01880 384 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
NUP188-204ENST00000467044 MTX1Q13505 466 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
NUP188-204ENST00000467044 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 TAF7LQ5H9L4 462 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 GREM2Q9H772 168 aa13.37□□□□□ -0.27
NUP188-204ENST00000467044 ANKRD18BA2A2Z9 1011 aa13.36□□□□□ -0.27
NUP188-204ENST00000467044 ITGA6P23229 1130 aa13.36□□□□□ -0.27
NUP188-204ENST00000467044 PDE6BP35913 854 aa13.36□□□□□ -0.27
NUP188-204ENST00000467044 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
NUP188-204ENST00000467044 POLA2Q14181 598 aa13.36□□□□□ -0.27
NUP188-204ENST00000467044 RPGRQ92834 1020 aaKnown RBP13.36□□□□□ -0.27
NUP188-204ENST00000467044 SPON1Q9HCB6 807 aa13.36□□□□□ -0.27
NUP188-204ENST00000467044 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
NUP188-204ENST00000467044 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
NUP188-204ENST00000467044 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
NUP188-204ENST00000467044 KLHDC4Q8TBB5 520 aa13.35□□□□□ -0.27
NUP188-204ENST00000467044 ZNF594Q96JF6 807 aaPredicted RBP13.35□□□□□ -0.27
NUP188-204ENST00000467044 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
NUP188-204ENST00000467044 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
NUP188-204ENST00000467044 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
NUP188-204ENST00000467044 ANKRD31Q8N7Z5 1873 aa13.34□□□□□ -0.27
NUP188-204ENST00000467044 RIC1Q4ADV7 1423 aa13.34□□□□□ -0.27
NUP188-204ENST00000467044 APBB1O00213 710 aa13.34□□□□□ -0.27
NUP188-204ENST00000467044 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
NUP188-204ENST00000467044 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
NUP188-204ENST00000467044 SIL1Q9H173 461 aa13.34□□□□□ -0.27
NUP188-204ENST00000467044 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
NUP188-204ENST00000467044 H0YIN7 160 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 PTGER2P43116 358 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 PTPN12Q05209 780 aaKnown RBP13.33□□□□□ -0.28
NUP188-204ENST00000467044 G3BP1Q13283 466 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■■■□ 23.1
NUP188-204ENST00000467044 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 RBM17Q96I25 401 aaKnown RBP13.33□□□□□ -0.28
NUP188-204ENST00000467044 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.28
NUP188-204ENST00000467044 BCL11AQ9H165 835 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 EXOC6BQ9Y2D4 811 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 TAF1P21675 1872 aa13.33□□□□□ -0.28
NUP188-204ENST00000467044 KLRG2A4D1S0 409 aaPredicted RBP13.32□□□□□ -0.28
NUP188-204ENST00000467044 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
NUP188-204ENST00000467044 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 LDHAL6AQ6ZMR3 332 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 CENPQQ7L2Z9 268 aaPredicted RBP13.32□□□□□ -0.28
NUP188-204ENST00000467044 ANKRD18AQ8IVF6 992 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 ZNF622Q969S3 477 aaKnown RBP eCLIP13.32□□□□□ -0.28
NUP188-204ENST00000467044 GCC1Q96CN9 775 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 MPHOSPH8Q99549 860 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 DCTPP1Q9H773 170 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
NUP188-204ENST00000467044 SRGNP10124 158 aa13.31□□□□□ -0.28
NUP188-204ENST00000467044 NPR1P16066 1061 aa13.31□□□□□ -0.28
NUP188-204ENST00000467044 CHRNA5P30532 468 aa13.31□□□□□ -0.28
NUP188-204ENST00000467044 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
NUP188-204ENST00000467044 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
NUP188-204ENST00000467044 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
NUP188-204ENST00000467044 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
NUP188-204ENST00000467044 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
NUP188-204ENST00000467044 PDZRN3Q9UPQ7 1066 aa13.31□□□□□ -0.28
NUP188-204ENST00000467044 C10orf71Q711Q0 1435 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 EYA2O00167 538 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 GRAPQ13588 217 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 LRRC24Q50LG9 513 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 ANKRD45Q5TZF3 282 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 GRAPLQ8TC17 118 aaPredicted RBP13.3□□□□□ -0.28
NUP188-204ENST00000467044 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
NUP188-204ENST00000467044 NOP58Q9Y2X3 529 aaKnown RBP13.3□□□□□ -0.28
NUP188-204ENST00000467044 A0A0G2JLW4 131 aa13.29□□□□□ -0.28
NUP188-204ENST00000467044 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
NUP188-204ENST00000467044 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
NUP188-204ENST00000467044 HOXA10P31260 410 aaPredicted RBP13.29□□□□□ -0.28
NUP188-204ENST00000467044 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
NUP188-204ENST00000467044 KDM2BQ8NHM5 1336 aa13.29□□□□□ -0.28
NUP188-204ENST00000467044 CIAO1O76071 339 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 DPEP1P16444 411 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 IL15P40933 162 aaPredicted RBP13.28□□□□□ -0.28
NUP188-204ENST00000467044 TGFB2P61812 414 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 ATG9AQ7Z3C6 839 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
NUP188-204ENST00000467044 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.28
NUP188-204ENST00000467044 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.28
NUP188-204ENST00000467044 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.29
NUP188-204ENST00000467044 BBOX1O75936 387 aa13.27□□□□□ -0.29
NUP188-204ENST00000467044 SASH1O94885 1247 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms