RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 INTS3Q68E01 1043 aaKnown RBP8.01□□□□□ -1.13
SF3B1-206ENST00000462613 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
SF3B1-206ENST00000462613 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
SF3B1-206ENST00000462613 CDC5LQ99459 802 aaKnown RBP8.01□□□□□ -1.13
SF3B1-206ENST00000462613 CHMP3Q9Y3E7 222 aa8.01□□□□□ -1.13
SF3B1-206ENST00000462613 FER1L6Q2WGJ9 1857 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 DICER1Q9UPY3 1922 aaKnown RBP8□□□□□ -1.13
SF3B1-206ENST00000462613 CTSWP56202 376 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 SF3B3Q15393 1217 aaKnown RBP8□□□□□ -1.13
SF3B1-206ENST00000462613 CRY2Q49AN0 593 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 CRAMP1Q96RY5 1269 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 PLA2G12BQ9BX93 195 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 SBF1O95248 1867 aa8□□□□□ -1.13
SF3B1-206ENST00000462613 ANKRD18BA2A2Z9 1011 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 BBOX1O75936 387 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 CENPBP07199 599 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 HOXA10P31260 410 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 IGHMBP2P38935 993 aaKnown RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 IFIT5Q13325 482 aaKnown RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 PDE3AQ14432 1141 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 CCDC57Q2TAC2 916 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 CCDC93Q567U6 631 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 PRPF40BQ6NWY9 871 aaKnown RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 ANKRD18AQ8IVF6 992 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 SYNE4Q8N205 404 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 JARID2Q92833 1246 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-206ENST00000462613 MPHOSPH8Q99549 860 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 DDX19BQ9UMR2 479 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 UTYO14607 1347 aa7.99□□□□□ -1.13
SF3B1-206ENST00000462613 NBPF7P0C2Y1 421 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-206ENST00000462613 KCNA3P22001 575 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 GRAPQ13588 217 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 ARHGAP27Q6ZUM4 889 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 RTKN2Q8IZC4 609 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 TMEM57Q8N5G2 664 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 TTLL11Q8NHH1 800 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 GRAPLQ8TC17 118 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-206ENST00000462613 USP44Q9H0E7 712 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 LRRC37AA6NMS7 1700 aa7.98□□□□□ -1.13
SF3B1-206ENST00000462613 RTL9Q8NET4 1388 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 C21orf2O43822 256 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 GNAI2P04899 355 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 ITGA6P23229 1130 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 CASP7P55210 303 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 RRP1P56182 461 aaKnown RBP7.97□□□□□ -1.13
SF3B1-206ENST00000462613 RPS8P62241 208 aaKnown RBP7.97□□□□□ -1.13
SF3B1-206ENST00000462613 MVPQ14764 893 aaKnown RBP7.97□□□□□ -1.13
SF3B1-206ENST00000462613 LMBR1LQ6UX01 489 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 SUPT20HQ8NEM7 779 aa7.97□□□□□ -1.13
SF3B1-206ENST00000462613 CCDC85AQ96PX6 553 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-206ENST00000462613 ZNF219Q9P2Y4 722 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-206ENST00000462613 MYH13Q9UKX3 1938 aa7.96□□□□□ -1.13
SF3B1-206ENST00000462613 PLIN1O60240 522 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 FAM161AQ3B820 660 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 SP8Q8IXZ3 490 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 PANK1Q8TE04 598 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 SUCLG2Q96I99 432 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 MEIS3Q99687 375 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 TAOK3Q9H2K8 898 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 BICC1Q9H694 974 aaKnown RBP7.96□□□□□ -1.14
SF3B1-206ENST00000462613 GREM2Q9H772 168 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 COG6Q9Y2V7 657 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 LRRFIP2Q9Y608 721 aaKnown RBP7.96□□□□□ -1.14
SF3B1-206ENST00000462613 A0A1B0GUL6 1792 aa7.96□□□□□ -1.14
SF3B1-206ENST00000462613 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 CSF1RP07333 972 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
SF3B1-206ENST00000462613 KCNJ4P48050 445 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 FOXO4P98177 505 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 RABL6Q3YEC7 729 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-206ENST00000462613 DPP8Q6V1X1 898 aaPredicted RBP7.95□□□□□ -1.14
SF3B1-206ENST00000462613 LDHAL6AQ6ZMR3 332 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 C3orf67Q6ZVT6 689 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 MPNDQ8N594 471 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 EYA3Q99504 573 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 ANKRD2Q9GZV1 360 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 CNNM1Q9NRU3 951 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
SF3B1-206ENST00000462613 G3V3G9 751 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 HMMRO75330 724 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 RLBP1P12271 317 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 FKBP4Q02790 459 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3B1-206ENST00000462613 DCAF8Q5TAQ9 597 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 CELF1Q92879 486 aaKnown RBP7.94□□□□□ -1.14
SF3B1-206ENST00000462613 SEC31BQ9NQW1 1179 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
SF3B1-206ENST00000462613 FBXO3Q9UK99 471 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
SF3B1-206ENST00000462613 TNNQ9UQP3 1299 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 LTBP3Q9NS15 1303 aa7.94□□□□□ -1.14
SF3B1-206ENST00000462613 C6orf229H3BNL8 230 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 ZBTB7BO15156 539 aaPredicted RBP7.93□□□□□ -1.14
SF3B1-206ENST00000462613 SRGAP3O43295 1099 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 LMNB1P20700 586 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 ATP2B4P23634 1241 aa7.93□□□□□ -1.14
SF3B1-206ENST00000462613 AAMPQ13685 434 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms