RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 GRAPQ13588 217 aa28.74■■■□□ 2.19
TRAF4-207ENST00000461195 GRAPLQ8TC17 118 aaPredicted RBP28.74■■■□□ 2.19
TRAF4-207ENST00000461195 DPY19L2Q6NUT2 758 aa28.72■■■□□ 2.19
TRAF4-207ENST00000461195 C16orf71Q8IYS4 520 aaPredicted RBP28.72■■■□□ 2.19
TRAF4-207ENST00000461195 DNAAF4Q8WXU2 420 aa28.72■■■□□ 2.19
TRAF4-207ENST00000461195 NEURL1BA8MQ27 555 aa28.71■■■□□ 2.19
TRAF4-207ENST00000461195 IARSP41252 1262 aaKnown RBP28.71■■■□□ 2.19
TRAF4-207ENST00000461195 CWF19L2Q2TBE0 894 aaKnown RBP28.71■■■□□ 2.19
TRAF4-207ENST00000461195 SLC51AQ86UW1 340 aa28.71■■■□□ 2.19
TRAF4-207ENST00000461195 JARID2Q92833 1246 aaPredicted RBP28.71■■■□□ 2.19
TRAF4-207ENST00000461195 PDE8AO60658 829 aa28.7■■■□□ 2.18
TRAF4-207ENST00000461195 TMC4Q7Z404 712 aa28.7■■■□□ 2.18
TRAF4-207ENST00000461195 SP8Q8IXZ3 490 aa28.7■■■□□ 2.18
TRAF4-207ENST00000461195 DNAJC5GQ8N7S2 189 aa28.7■■■□□ 2.18
TRAF4-207ENST00000461195 RRAGCQ9HB90 399 aa28.7■■■□□ 2.18
TRAF4-207ENST00000461195 CDHR2Q9BYE9 1310 aa28.69■■■□□ 2.18
TRAF4-207ENST00000461195 RBM46Q8TBY0 533 aaKnown RBP28.69■■■□□ 2.18
TRAF4-207ENST00000461195 CDCA7LQ96GN5 454 aa28.68■■■□□ 2.18
TRAF4-207ENST00000461195 LINS1Q8NG48 757 aa28.67■■■□□ 2.18
TRAF4-207ENST00000461195 CCDC152Q4G0S7 254 aa28.66■■■□□ 2.18
TRAF4-207ENST00000461195 CELF1Q92879 486 aaKnown RBP28.66■■■□□ 2.18
TRAF4-207ENST00000461195 WDR90Q96KV7 1748 aa28.66■■■□□ 2.18
TRAF4-207ENST00000461195 GCKRQ14397 625 aa28.65■■■□□ 2.18
TRAF4-207ENST00000461195 LRRC37AA6NMS7 1700 aa28.65■■■□□ 2.18
TRAF4-207ENST00000461195 MYH3P11055 1940 aa28.65■■■□□ 2.18
TRAF4-207ENST00000461195 F6X3S4 739 aa28.64■■■□□ 2.18
TRAF4-207ENST00000461195 H7C1W4 665 aa28.64■■■□□ 2.18
TRAF4-207ENST00000461195 VEGFAP15692 232 aaPredicted RBP28.64■■■□□ 2.18
TRAF4-207ENST00000461195 DPP8Q6V1X1 898 aaPredicted RBP28.64■■■□□ 2.18
TRAF4-207ENST00000461195 TRMT2AQ8IZ69 625 aaKnown RBP28.64■■■□□ 2.18
TRAF4-207ENST00000461195 MPNDQ8N594 471 aa28.64■■■□□ 2.18
TRAF4-207ENST00000461195 SUPT20HQ8NEM7 779 aa28.64■■■□□ 2.18
TRAF4-207ENST00000461195 JDP2Q8WYK2 163 aa28.64■■■□□ 2.18
TRAF4-207ENST00000461195 UBE3BQ7Z3V4 1068 aa28.63■■■□□ 2.17
TRAF4-207ENST00000461195 RTFDC1Q9BY42 306 aaPredicted RBP28.63■■■□□ 2.17
TRAF4-207ENST00000461195 COL4A1P02462 1669 aa28.62■■■□□ 2.17
TRAF4-207ENST00000461195 DDNO94850 711 aaPredicted RBP28.62■■■□□ 2.17
TRAF4-207ENST00000461195 RPS8P62241 208 aaKnown RBP28.62■■■□□ 2.17
TRAF4-207ENST00000461195 LARGE2Q8N3Y3 721 aa28.62■■■□□ 2.17
TRAF4-207ENST00000461195 VPS33BQ9H267 617 aa28.62■■■□□ 2.17
TRAF4-207ENST00000461195 FZD9O00144 591 aa28.61■■■□□ 2.17
TRAF4-207ENST00000461195 CTSWP56202 376 aa28.61■■■□□ 2.17
TRAF4-207ENST00000461195 HTRA3P83110 453 aa28.61■■■□□ 2.17
TRAF4-207ENST00000461195 FSTL1Q12841 308 aa28.61■■■□□ 2.17
TRAF4-207ENST00000461195 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
TRAF4-207ENST00000461195 BEND3Q5T5X7 828 aa28.6■■■□□ 2.17
TRAF4-207ENST00000461195 MRPL50Q8N5N7 158 aaKnown RBP28.6■■■□□ 2.17
TRAF4-207ENST00000461195 CCDC85AQ96PX6 553 aaPredicted RBP28.6■■■□□ 2.17
TRAF4-207ENST00000461195 ZNF541Q9H0D2 1346 aa28.6■■■□□ 2.17
TRAF4-207ENST00000461195 COL4A5P29400 1685 aa28.6■■■□□ 2.17
TRAF4-207ENST00000461195 PPIP5K2O43314 1243 aa28.59■■■□□ 2.17
TRAF4-207ENST00000461195 POTECB2RU33 542 aa28.58■■■□□ 2.17
TRAF4-207ENST00000461195 TTLL11Q8NHH1 800 aa28.58■■■□□ 2.17
TRAF4-207ENST00000461195 SSH1Q8WYL5 1049 aa28.58■■■□□ 2.17
TRAF4-207ENST00000461195 CASP7P55210 303 aa28.57■■■□□ 2.16
TRAF4-207ENST00000461195 AOC3Q16853 763 aa28.57■■■□□ 2.16
TRAF4-207ENST00000461195 NIM1KQ8IY84 436 aa28.57■■■□□ 2.16
TRAF4-207ENST00000461195 EIF6P56537 245 aaKnown RBP28.56■■■□□ 2.16
TRAF4-207ENST00000461195 SLC4A10Q6U841 1118 aa28.56■■■□□ 2.16
TRAF4-207ENST00000461195 PLA2G12BQ9BX93 195 aa28.56■■■□□ 2.16
TRAF4-207ENST00000461195 DUOX1Q9NRD9 1551 aa28.56■■■□□ 2.16
TRAF4-207ENST00000461195 NSFL1CQ9UNZ2 370 aaKnown RBP28.56■■■□□ 2.16
TRAF4-207ENST00000461195 RTL9Q8NET4 1388 aa28.55■■■□□ 2.16
TRAF4-207ENST00000461195 CT47B1P0C2W7 299 aaPredicted RBP28.55■■■□□ 2.16
TRAF4-207ENST00000461195 ALDH1L2Q3SY69 923 aa28.55■■■□□ 2.16
TRAF4-207ENST00000461195 ANKRD18AQ8IVF6 992 aa28.55■■■□□ 2.16
TRAF4-207ENST00000461195 L3MBTL3Q96JM7 780 aaPredicted RBP28.55■■■□□ 2.16
TRAF4-207ENST00000461195 PTPRCP08575 1304 aa28.54■■■□□ 2.16
TRAF4-207ENST00000461195 KIAA2012Q0VF49 1180 aa28.54■■■□□ 2.16
TRAF4-207ENST00000461195 KLRG1Q96E93 195 aa28.54■■■□□ 2.16
TRAF4-207ENST00000461195 CDC5LQ99459 802 aaKnown RBP28.54■■■□□ 2.16
TRAF4-207ENST00000461195 GREM2Q9H772 168 aa28.54■■■□□ 2.16
TRAF4-207ENST00000461195 SCN4AP35499 1836 aa28.54■■■□□ 2.16
TRAF4-207ENST00000461195 LTBP1Q14766 1721 aa28.53■■■□□ 2.16
TRAF4-207ENST00000461195 ALDH1L1O75891 902 aa28.53■■■□□ 2.16
TRAF4-207ENST00000461195 GPSM2P81274 684 aa28.53■■■□□ 2.16
TRAF4-207ENST00000461195 GPC2Q8N158 579 aa28.53■■■□□ 2.16
TRAF4-207ENST00000461195 BCL2L13Q9BXK5 485 aa28.53■■■□□ 2.16
TRAF4-207ENST00000461195 IQCA1LA6NCM1 817 aa28.52■■■□□ 2.16
TRAF4-207ENST00000461195 SRCIN1Q9C0H9 1055 aa28.52■■■□□ 2.16
TRAF4-207ENST00000461195 SMC1BQ8NDV3 1235 aa28.51■■■□□ 2.15
TRAF4-207ENST00000461195 SMC4Q9NTJ3 1288 aa28.51■■■□□ 2.15
TRAF4-207ENST00000461195 SPEF2Q9C093 1822 aa28.5■■■□□ 2.15
TRAF4-207ENST00000461195 C6orf229H3BNL8 230 aa28.5■■■□□ 2.15
TRAF4-207ENST00000461195 GRM8O00222 908 aa28.5■■■□□ 2.15
TRAF4-207ENST00000461195 HNRNPUQ00839 825 aaKnown RBP eCLIP28.5■■■□□ 2.15
TRAF4-207ENST00000461195 POLLQ9UGP5 575 aa28.5■■■□□ 2.15
TRAF4-207ENST00000461195 ZNRF3Q9ULT6 936 aa28.5■■■□□ 2.15
TRAF4-207ENST00000461195 CSF1RP07333 972 aa28.49■■■□□ 2.15
TRAF4-207ENST00000461195 WASHC4Q2M389 1173 aa28.49■■■□□ 2.15
TRAF4-207ENST00000461195 PODXL2Q9NZ53 605 aa28.49■■■□□ 2.15
TRAF4-207ENST00000461195 C9orf78Q9NZ63 289 aaPredicted RBP28.49■■■□□ 2.15
TRAF4-207ENST00000461195 ANKIB1Q9P2G1 1089 aa28.49■■■□□ 2.15
TRAF4-207ENST00000461195 GJA3Q9Y6H8 435 aa28.49■■■□□ 2.15
TRAF4-207ENST00000461195 TBC1D16Q8TBP0 767 aa28.48■■■□□ 2.15
TRAF4-207ENST00000461195 EYA3Q99504 573 aa28.48■■■□□ 2.15
TRAF4-207ENST00000461195 FAM161AQ3B820 660 aa28.47■■■□□ 2.15
TRAF4-207ENST00000461195 BSDC1Q9NW68 430 aaPredicted RBP28.47■■■□□ 2.15
TRAF4-207ENST00000461195 ITGA6P23229 1130 aa28.46■■■□□ 2.15
TRAF4-207ENST00000461195 JMYQ8N9B5 988 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms