RNA–Protein interactions for RNA: ENST00000460217.1

FN1-214, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-214ENST00000460217 HMMRO75330 724 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
FN1-214ENST00000460217 POLD1P28340 1107 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 POLA2Q14181 598 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 TTLL11Q8NHH1 800 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 NLRP3Q96P20 1036 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
FN1-214ENST00000460217 PNMA6EA0A0J9YXQ4 647 aa13.36□□□□□ -0.27
FN1-214ENST00000460217 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
FN1-214ENST00000460217 CRY2Q49AN0 593 aa13.36□□□□□ -0.27
FN1-214ENST00000460217 CCDC152Q4G0S7 254 aa13.36□□□□□ -0.27
FN1-214ENST00000460217 PTGER2P43116 358 aa13.35□□□□□ -0.27
FN1-214ENST00000460217 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
FN1-214ENST00000460217 PDZRN3Q9UPQ7 1066 aa13.35□□□□□ -0.27
FN1-214ENST00000460217 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
FN1-214ENST00000460217 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
FN1-214ENST00000460217 PDE6BP35913 854 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 RFX5P48382 616 aaPredicted RBP13.34□□□□□ -0.27
FN1-214ENST00000460217 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
FN1-214ENST00000460217 FAM161AQ3B820 660 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 GREM2Q9H772 168 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 LRP5O75197 1615 aa13.34□□□□□ -0.27
FN1-214ENST00000460217 COL11A2P13942 1736 aaPredicted RBP13.33□□□□□ -0.27
FN1-214ENST00000460217 ITGA6P23229 1130 aa13.33□□□□□ -0.28
FN1-214ENST00000460217 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
FN1-214ENST00000460217 CCDC57Q2TAC2 916 aa13.33□□□□□ -0.28
FN1-214ENST00000460217 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
FN1-214ENST00000460217 COPRSQ9NQ92 184 aa13.33□□□□□ -0.28
FN1-214ENST00000460217 TAF1P21675 1872 aa13.33□□□□□ -0.28
FN1-214ENST00000460217 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
FN1-214ENST00000460217 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
FN1-214ENST00000460217 NOP58Q9Y2X3 529 aaKnown RBP13.32□□□□□ -0.28
FN1-214ENST00000460217 CHMP3Q9Y3E7 222 aa13.32□□□□□ -0.28
FN1-214ENST00000460217 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
FN1-214ENST00000460217 KIAA1551Q9HCM1 1747 aa13.31□□□□□ -0.28
FN1-214ENST00000460217 IGHDP01880 384 aa13.31□□□□□ -0.28
FN1-214ENST00000460217 SRGNP10124 158 aa13.31□□□□□ -0.28
FN1-214ENST00000460217 PTPN12Q05209 780 aaKnown RBP13.31□□□□□ -0.28
FN1-214ENST00000460217 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
FN1-214ENST00000460217 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
FN1-214ENST00000460217 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
FN1-214ENST00000460217 DCTPP1Q9H773 170 aa13.31□□□□□ -0.28
FN1-214ENST00000460217 SPEF2Q9C093 1822 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 CIAO1O76071 339 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 NPR1P16066 1061 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
FN1-214ENST00000460217 RPGRQ92834 1020 aaKnown RBP13.3□□□□□ -0.28
FN1-214ENST00000460217 GCC1Q96CN9 775 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
FN1-214ENST00000460217 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
FN1-214ENST00000460217 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
FN1-214ENST00000460217 COL4A1P02462 1669 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 TGFB2P61812 414 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 STYK1Q6J9G0 422 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 CENPQQ7L2Z9 268 aaPredicted RBP13.29□□□□□ -0.28
FN1-214ENST00000460217 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
FN1-214ENST00000460217 SEC31BQ9NQW1 1179 aa13.29□□□□□ -0.28
FN1-214ENST00000460217 H0YIN7 160 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 EYA2O00167 538 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
FN1-214ENST00000460217 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
FN1-214ENST00000460217 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
FN1-214ENST00000460217 GRAPQ13588 217 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 ERC1Q8IUD2 1116 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 KLHDC4Q8TBB5 520 aa13.28□□□□□ -0.28
FN1-214ENST00000460217 GRAPLQ8TC17 118 aaPredicted RBP13.28□□□□□ -0.28
FN1-214ENST00000460217 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
FN1-214ENST00000460217 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.28
FN1-214ENST00000460217 A0A1B0GUL6 1792 aa13.27□□□□□ -0.28
FN1-214ENST00000460217 BBOX1O75936 387 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 IL15P40933 162 aaPredicted RBP13.27□□□□□ -0.29
FN1-214ENST00000460217 G3BP1Q13283 466 aaKnown RBP eCLIP13.27□□□□□ -0.29
FN1-214ENST00000460217 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 ATG9AQ7Z3C6 839 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 CELF1Q92879 486 aaKnown RBP13.27□□□□□ -0.29
FN1-214ENST00000460217 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.29
FN1-214ENST00000460217 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 BSDC1Q9NW68 430 aaPredicted RBP13.27□□□□□ -0.29
FN1-214ENST00000460217 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 RIPOR2Q9Y4F9 1068 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 CACNA1SQ13698 1873 aa13.27□□□□□ -0.29
FN1-214ENST00000460217 SLX4Q8IY92 1834 aa13.26□□□□□ -0.29
FN1-214ENST00000460217 CNKSR1Q969H4 720 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms