RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
CCDC12-204ENST00000460035 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
CCDC12-204ENST00000460035 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
CCDC12-204ENST00000460035 UTYO14607 1347 aa13.69□□□□□ -0.22
CCDC12-204ENST00000460035 YBX3P16989 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC12-204ENST00000460035 SF3B3Q15393 1217 aaKnown RBP13.69□□□□□ -0.22
CCDC12-204ENST00000460035 INTS3Q68E01 1043 aaKnown RBP13.69□□□□□ -0.22
CCDC12-204ENST00000460035 DDX46Q7L014 1031 aaKnown RBP13.69□□□□□ -0.22
CCDC12-204ENST00000460035 FTSJ3Q8IY81 847 aaKnown RBP13.69□□□□□ -0.22
CCDC12-204ENST00000460035 PLIN1O60240 522 aa13.68□□□□□ -0.22
CCDC12-204ENST00000460035 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
CCDC12-204ENST00000460035 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-204ENST00000460035 ARHGAP27Q6ZUM4 889 aa13.68□□□□□ -0.22
CCDC12-204ENST00000460035 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
CCDC12-204ENST00000460035 CRAMP1Q96RY5 1269 aa13.68□□□□□ -0.22
CCDC12-204ENST00000460035 COL4A1P02462 1669 aa13.68□□□□□ -0.22
CCDC12-204ENST00000460035 C21orf2O43822 256 aa13.67□□□□□ -0.22
CCDC12-204ENST00000460035 CTSWP56202 376 aa13.67□□□□□ -0.22
CCDC12-204ENST00000460035 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
CCDC12-204ENST00000460035 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
CCDC12-204ENST00000460035 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
CCDC12-204ENST00000460035 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
CCDC12-204ENST00000460035 RTL9Q8NET4 1388 aa13.67□□□□□ -0.22
CCDC12-204ENST00000460035 MS4A1P11836 297 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 TMEM57Q8N5G2 664 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 PANK1Q8TE04 598 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 TMX4Q9H1E5 349 aaPredicted RBP13.66□□□□□ -0.22
CCDC12-204ENST00000460035 CHMP3Q9Y3E7 222 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 LTBP1Q14766 1721 aa13.66□□□□□ -0.22
CCDC12-204ENST00000460035 BBOX1O75936 387 aa13.65□□□□□ -0.22
CCDC12-204ENST00000460035 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
CCDC12-204ENST00000460035 ITPRIPQ8IWB1 547 aa13.65□□□□□ -0.22
CCDC12-204ENST00000460035 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
CCDC12-204ENST00000460035 SEC31BQ9NQW1 1179 aa13.65□□□□□ -0.22
CCDC12-204ENST00000460035 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
CCDC12-204ENST00000460035 CSF1RP07333 972 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 RLBP1P12271 317 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
CCDC12-204ENST00000460035 FOXO4P98177 505 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 GRAPQ13588 217 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 EPHA10Q5JZY3 1008 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 GRAPLQ8TC17 118 aaPredicted RBP13.64□□□□□ -0.23
CCDC12-204ENST00000460035 CELF1Q92879 486 aaKnown RBP13.64□□□□□ -0.23
CCDC12-204ENST00000460035 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
CCDC12-204ENST00000460035 OLFM4Q6UX06 510 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 C7orf43Q8WVR3 580 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 MEIS3Q99687 375 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 GREM2Q9H772 168 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 SNED1Q8TER0 1413 aa13.63□□□□□ -0.23
CCDC12-204ENST00000460035 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
CCDC12-204ENST00000460035 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 ANKRD18BA2A2Z9 1011 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 GNAI3P08754 354 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 IFIT5Q13325 482 aaKnown RBP13.62□□□□□ -0.23
CCDC12-204ENST00000460035 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
CCDC12-204ENST00000460035 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 TMC4Q7Z404 712 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
CCDC12-204ENST00000460035 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
CCDC12-204ENST00000460035 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
CCDC12-204ENST00000460035 ITGA6P23229 1130 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 CC2D2BQ6DHV5 1058 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 SP8Q8IXZ3 490 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
CCDC12-204ENST00000460035 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
CCDC12-204ENST00000460035 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
CCDC12-204ENST00000460035 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 C20orf194Q5TEA3 1177 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 PSME4Q14997 1843 aa13.6□□□□□ -0.23
CCDC12-204ENST00000460035 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
CCDC12-204ENST00000460035 ZBTB7BO15156 539 aaPredicted RBP13.59□□□□□ -0.23
CCDC12-204ENST00000460035 GNAI2P04899 355 aa13.59□□□□□ -0.23
CCDC12-204ENST00000460035 RRP1P56182 461 aaKnown RBP13.59□□□□□ -0.23
CCDC12-204ENST00000460035 SLC51AQ86UW1 340 aa13.59□□□□□ -0.23
CCDC12-204ENST00000460035 MPNDQ8N594 471 aa13.59□□□□□ -0.23
CCDC12-204ENST00000460035 ZNF594Q96JF6 807 aaPredicted RBP13.59□□□□□ -0.23
CCDC12-204ENST00000460035 RASSF7Q02833 373 aa13.58□□□□□ -0.24
CCDC12-204ENST00000460035 MVPQ14764 893 aaKnown RBP13.58□□□□□ -0.24
CCDC12-204ENST00000460035 DPP8Q6V1X1 898 aaPredicted RBP13.58□□□□□ -0.24
CCDC12-204ENST00000460035 TAOK3Q9H2K8 898 aa13.58□□□□□ -0.24
CCDC12-204ENST00000460035 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
CCDC12-204ENST00000460035 NFKBIEO00221 500 aa13.57□□□□□ -0.24
CCDC12-204ENST00000460035 BSDC1Q9NW68 430 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-204ENST00000460035 ANKIB1Q9P2G1 1089 aa13.57□□□□□ -0.24
CCDC12-204ENST00000460035 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
CCDC12-204ENST00000460035 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
CCDC12-204ENST00000460035 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms