RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
COL18A1-206ENST00000459895 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
COL18A1-206ENST00000459895 CCDC88AQ3V6T2 1871 aa16.21■□□□□ 0.19
COL18A1-206ENST00000459895 IPO8O15397 1037 aaKnown RBP16.21■□□□□ 0.19
COL18A1-206ENST00000459895 NBPF7P0C2Y1 421 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-206ENST00000459895 RLBP1P12271 317 aa16.21■□□□□ 0.19
COL18A1-206ENST00000459895 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-206ENST00000459895 CNKSR1Q969H4 720 aa16.21■□□□□ 0.19
COL18A1-206ENST00000459895 CCDC85AQ96PX6 553 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-206ENST00000459895 RTL9Q8NET4 1388 aa16.21■□□□□ 0.19
COL18A1-206ENST00000459895 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
COL18A1-206ENST00000459895 INTS3Q68E01 1043 aaKnown RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
COL18A1-206ENST00000459895 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 SUCLG2Q96I99 432 aa16.2■□□□□ 0.18
COL18A1-206ENST00000459895 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
COL18A1-206ENST00000459895 C9orf78Q9NZ63 289 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-206ENST00000459895 DICER1Q9UPY3 1922 aaKnown RBP16.19■□□□□ 0.18
COL18A1-206ENST00000459895 EPHA10Q5JZY3 1008 aa16.19■□□□□ 0.18
COL18A1-206ENST00000459895 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
COL18A1-206ENST00000459895 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
COL18A1-206ENST00000459895 CRAMP1Q96RY5 1269 aa16.19■□□□□ 0.18
COL18A1-206ENST00000459895 MEIS3Q99687 375 aa16.19■□□□□ 0.18
COL18A1-206ENST00000459895 C21orf2O43822 256 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 PLIN1O60240 522 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
COL18A1-206ENST00000459895 FOXO4P98177 505 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 RASSF7Q02833 373 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 GRAPQ13588 217 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 CCDC152Q4G0S7 254 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
COL18A1-206ENST00000459895 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
COL18A1-206ENST00000459895 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
COL18A1-206ENST00000459895 KAZALD1Q96I82 304 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 GREM2Q9H772 168 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 COL4A5P29400 1685 aa16.18■□□□□ 0.18
COL18A1-206ENST00000459895 DZIP1LQ8IYY4 767 aaKnown RBP16.17■□□□□ 0.18
COL18A1-206ENST00000459895 TTLL11Q8NHH1 800 aa16.17■□□□□ 0.18
COL18A1-206ENST00000459895 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
COL18A1-206ENST00000459895 NFKBIEO00221 500 aa16.16■□□□□ 0.18
COL18A1-206ENST00000459895 ALDH1B1P30837 517 aa16.16■□□□□ 0.18
COL18A1-206ENST00000459895 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
COL18A1-206ENST00000459895 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
COL18A1-206ENST00000459895 C7orf43Q8WVR3 580 aa16.16■□□□□ 0.18
COL18A1-206ENST00000459895 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
COL18A1-206ENST00000459895 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-206ENST00000459895 CCDC93Q567U6 631 aa16.15■□□□□ 0.18
COL18A1-206ENST00000459895 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 DCAF8L1A6NGE4 600 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 CSF1RP07333 972 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 RRP1P56182 461 aaKnown RBP16.14■□□□□ 0.17
COL18A1-206ENST00000459895 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-206ENST00000459895 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
COL18A1-206ENST00000459895 LRRFIP2Q9Y608 721 aaKnown RBP16.14■□□□□ 0.17
COL18A1-206ENST00000459895 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-206ENST00000459895 ITGA6P23229 1130 aa16.13■□□□□ 0.17
COL18A1-206ENST00000459895 ATP6V0A2Q9Y487 856 aa16.13■□□□□ 0.17
COL18A1-206ENST00000459895 PRELPP51888 382 aa16.12■□□□□ 0.17
COL18A1-206ENST00000459895 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
COL18A1-206ENST00000459895 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
COL18A1-206ENST00000459895 CDC5LQ99459 802 aaKnown RBP16.12■□□□□ 0.17
COL18A1-206ENST00000459895 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
COL18A1-206ENST00000459895 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
COL18A1-206ENST00000459895 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
COL18A1-206ENST00000459895 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
COL18A1-206ENST00000459895 GNAI3P08754 354 aa16.1■□□□□ 0.17
COL18A1-206ENST00000459895 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
COL18A1-206ENST00000459895 C1orf115Q9H7X2 142 aa16.1■□□□□ 0.17
COL18A1-206ENST00000459895 COG6Q9Y2V7 657 aa16.1■□□□□ 0.17
COL18A1-206ENST00000459895 PSME4Q14997 1843 aa16.1■□□□□ 0.17
COL18A1-206ENST00000459895 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
COL18A1-206ENST00000459895 BBOX1O75936 387 aa16.09■□□□□ 0.17
COL18A1-206ENST00000459895 RPS8P62241 208 aaKnown RBP16.09■□□□□ 0.17
COL18A1-206ENST00000459895 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
COL18A1-206ENST00000459895 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
COL18A1-206ENST00000459895 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
COL18A1-206ENST00000459895 ZNF594Q96JF6 807 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-206ENST00000459895 MS4A1P11836 297 aa16.08■□□□□ 0.16
COL18A1-206ENST00000459895 SP8Q8IXZ3 490 aa16.08■□□□□ 0.16
COL18A1-206ENST00000459895 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
COL18A1-206ENST00000459895 GPSM2P81274 684 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 PDE3AQ14432 1141 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 CCDC57Q2TAC2 916 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 KLHDC4Q8TBB5 520 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 PSMD1Q99460 953 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 RNF181Q9P0P0 153 aa16.07■□□□□ 0.16
COL18A1-206ENST00000459895 GNAI2P04899 355 aa16.06■□□□□ 0.16
COL18A1-206ENST00000459895 RFX5P48382 616 aaPredicted RBP16.06■□□□□ 0.16
COL18A1-206ENST00000459895 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
COL18A1-206ENST00000459895 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms