RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-228ENST00000459788 PHAXQ9H814 394 aaKnown RBP12.87□□□□□ -0.35
HDLBP-228ENST00000459788 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
HDLBP-228ENST00000459788 CDHR2Q9BYE9 1310 aa12.87□□□□□ -0.35
HDLBP-228ENST00000459788 ELL2O00472 640 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-228ENST00000459788 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-228ENST00000459788 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-228ENST00000459788 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-228ENST00000459788 NIM1KQ8IY84 436 aa12.86□□□□□ -0.35
HDLBP-228ENST00000459788 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
HDLBP-228ENST00000459788 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-228ENST00000459788 COL4A5P29400 1685 aa12.86□□□□□ -0.35
HDLBP-228ENST00000459788 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
HDLBP-228ENST00000459788 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 ATP5J2-PTCD1G3V325 749 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 KIAA2012Q0VF49 1180 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 KLRG1Q96E93 195 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 ZNRF3Q9ULT6 936 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 PSME4Q14997 1843 aa12.85□□□□□ -0.35
HDLBP-228ENST00000459788 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 PDE8AO60658 829 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 EPHX2P34913 555 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 CCDC152Q4G0S7 254 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 TSR2Q969E8 191 aaKnown RBP12.84□□□□□ -0.35
HDLBP-228ENST00000459788 MYD88Q99836 296 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 FANCIQ9NVI1 1328 aa12.84□□□□□ -0.35
HDLBP-228ENST00000459788 LMOD1P29536 600 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-228ENST00000459788 RPS8P62241 208 aaKnown RBP12.83□□□□□ -0.36
HDLBP-228ENST00000459788 MYH16Q9H6N6 1097 aa12.83□□□□□ -0.36
HDLBP-228ENST00000459788 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
HDLBP-228ENST00000459788 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
HDLBP-228ENST00000459788 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
HDLBP-228ENST00000459788 PASKQ96RG2 1323 aa12.83□□□□□ -0.36
HDLBP-228ENST00000459788 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 PI4KAP2A4QPH2 592 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 TNIP1Q15025 636 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-228ENST00000459788 PI4KAP1Q8N8J0 262 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 EYA3Q99504 573 aa12.82□□□□□ -0.36
HDLBP-228ENST00000459788 VAMP4O75379 141 aa12.81□□□□□ -0.36
HDLBP-228ENST00000459788 AOC3Q16853 763 aa12.81□□□□□ -0.36
HDLBP-228ENST00000459788 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
HDLBP-228ENST00000459788 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
HDLBP-228ENST00000459788 ITGBL1O95965 494 aaPredicted RBP12.8□□□□□ -0.36
HDLBP-228ENST00000459788 SCNN1DP51172 638 aa12.8□□□□□ -0.36
HDLBP-228ENST00000459788 FLIIQ13045 1269 aa12.8□□□□□ -0.36
HDLBP-228ENST00000459788 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
HDLBP-228ENST00000459788 PLA2G12BQ9BX93 195 aa12.8□□□□□ -0.36
HDLBP-228ENST00000459788 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 H7C1W4 665 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 CXCL9Q07325 125 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 WASHC4Q2M389 1173 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 LINS1Q8NG48 757 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
HDLBP-228ENST00000459788 GPRC5DQ9NZD1 345 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
HDLBP-228ENST00000459788 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 PCNTO95613 3336 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 ZNF609O15014 1411 aa12.79□□□□□ -0.36
HDLBP-228ENST00000459788 SPEF2Q9C093 1822 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 POTEJP0CG39 1038 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 RPS12P25398 132 aaKnown RBP12.78□□□□□ -0.36
HDLBP-228ENST00000459788 CTSWP56202 376 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-228ENST00000459788 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
HDLBP-228ENST00000459788 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 DPF2Q92785 391 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
HDLBP-228ENST00000459788 TMEM88BA6NKF7 163 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 EXOSC9Q06265 439 aaKnown RBP12.77□□□□□ -0.37
HDLBP-228ENST00000459788 FKBP5Q13451 457 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-228ENST00000459788 GCKRQ14397 625 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 RTL5Q5HYW3 569 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-228ENST00000459788 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 TTLL11Q8NHH1 800 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 TBC1D16Q8TBP0 767 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 ZNF428Q96B54 188 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 PGAP2Q9UHJ9 254 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 POLR2AP24928 1970 aaKnown RBP12.77□□□□□ -0.37
HDLBP-228ENST00000459788 SCN9AQ15858 1988 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 XDHP47989 1333 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 COL4A1P02462 1669 aa12.77□□□□□ -0.37
HDLBP-228ENST00000459788 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
HDLBP-228ENST00000459788 EPS15P42566 896 aa12.76□□□□□ -0.37
HDLBP-228ENST00000459788 GPSM2P81274 684 aa12.76□□□□□ -0.37
HDLBP-228ENST00000459788 G2E3Q7L622 706 aa12.76□□□□□ -0.37
HDLBP-228ENST00000459788 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
HDLBP-228ENST00000459788 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-228ENST00000459788 POLLQ9UGP5 575 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms