RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 PDE8AO60658 829 aa22.57■■□□□ 1.2
COPS7A-202ENST00000455113 C16orf71Q8IYS4 520 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-202ENST00000455113 ZNF277Q9NRM2 450 aaPredicted RBP22.57■■□□□ 1.2
COPS7A-202ENST00000455113 IGKV5-2P06315 115 aa22.56■■□□□ 1.2
COPS7A-202ENST00000455113 CWF19L2Q2TBE0 894 aaKnown RBP22.56■■□□□ 1.2
COPS7A-202ENST00000455113 NEURL1BA8MQ27 555 aa22.55■■□□□ 1.2
COPS7A-202ENST00000455113 IARSP41252 1262 aaKnown RBP22.55■■□□□ 1.2
COPS7A-202ENST00000455113 CCDC152Q4G0S7 254 aa22.55■■□□□ 1.2
COPS7A-202ENST00000455113 SP8Q8IXZ3 490 aa22.55■■□□□ 1.2
COPS7A-202ENST00000455113 JDP2Q8WYK2 163 aa22.55■■□□□ 1.2
COPS7A-202ENST00000455113 LINS1Q8NG48 757 aa22.54■■□□□ 1.2
COPS7A-202ENST00000455113 NMRK2Q9NPI5 230 aa22.54■■□□□ 1.2
COPS7A-202ENST00000455113 CDHR2Q9BYE9 1310 aa22.54■■□□□ 1.2
COPS7A-202ENST00000455113 SUPT20HQ8NEM7 779 aa22.54■■□□□ 1.2
COPS7A-202ENST00000455113 KIF3CO14782 793 aa22.53■■□□□ 1.2
COPS7A-202ENST00000455113 JARID2Q92833 1246 aaPredicted RBP22.53■■□□□ 1.2
COPS7A-202ENST00000455113 RRAGCQ9HB90 399 aa22.53■■□□□ 1.2
COPS7A-202ENST00000455113 DPP8Q6V1X1 898 aaPredicted RBP22.52■■□□□ 1.2
COPS7A-202ENST00000455113 GCKRQ14397 625 aa22.51■■□□□ 1.19
COPS7A-202ENST00000455113 MPNDQ8N594 471 aa22.51■■□□□ 1.19
COPS7A-202ENST00000455113 UBE3BQ7Z3V4 1068 aa22.51■■□□□ 1.19
COPS7A-202ENST00000455113 LARGE2Q8N3Y3 721 aa22.51■■□□□ 1.19
COPS7A-202ENST00000455113 F6X3S4 739 aa22.5■■□□□ 1.19
COPS7A-202ENST00000455113 TOMM70O94826 608 aa22.5■■□□□ 1.19
COPS7A-202ENST00000455113 RPS8P62241 208 aaKnown RBP22.5■■□□□ 1.19
COPS7A-202ENST00000455113 CELF1Q92879 486 aaKnown RBP22.5■■□□□ 1.19
COPS7A-202ENST00000455113 VPS33BQ9H267 617 aa22.5■■□□□ 1.19
COPS7A-202ENST00000455113 TAF1P21675 1872 aa22.5■■□□□ 1.19
COPS7A-202ENST00000455113 CT47B1P0C2W7 299 aaPredicted RBP22.49■■□□□ 1.19
COPS7A-202ENST00000455113 VEGFAP15692 232 aaPredicted RBP22.49■■□□□ 1.19
COPS7A-202ENST00000455113 SLC4A10Q6U841 1118 aa22.49■■□□□ 1.19
COPS7A-202ENST00000455113 SNED1Q8TER0 1413 aa22.49■■□□□ 1.19
COPS7A-202ENST00000455113 H7C1W4 665 aa22.48■■□□□ 1.19
COPS7A-202ENST00000455113 CTSWP56202 376 aa22.48■■□□□ 1.19
COPS7A-202ENST00000455113 CCDC85AQ96PX6 553 aaPredicted RBP22.48■■□□□ 1.19
COPS7A-202ENST00000455113 PPIP5K2O43314 1243 aa22.48■■□□□ 1.19
COPS7A-202ENST00000455113 MYH3P11055 1940 aa22.48■■□□□ 1.19
COPS7A-202ENST00000455113 EIF6P56537 245 aaKnown RBP22.47■■□□□ 1.19
COPS7A-202ENST00000455113 ALDH1L2Q3SY69 923 aa22.47■■□□□ 1.19
COPS7A-202ENST00000455113 NIM1KQ8IY84 436 aa22.47■■□□□ 1.19
COPS7A-202ENST00000455113 CDC5LQ99459 802 aaKnown RBP22.47■■□□□ 1.19
COPS7A-202ENST00000455113 NSFL1CQ9UNZ2 370 aaKnown RBP22.47■■□□□ 1.19
COPS7A-202ENST00000455113 PTPRCP08575 1304 aa22.47■■□□□ 1.19
COPS7A-202ENST00000455113 BEND3Q5T5X7 828 aa22.46■■□□□ 1.19
COPS7A-202ENST00000455113 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
COPS7A-202ENST00000455113 MRPL50Q8N5N7 158 aaKnown RBP22.46■■□□□ 1.19
COPS7A-202ENST00000455113 SEC31BQ9NQW1 1179 aa22.46■■□□□ 1.19
COPS7A-202ENST00000455113 DDNO94850 711 aaPredicted RBP22.45■■□□□ 1.19
COPS7A-202ENST00000455113 SSH1Q8WYL5 1049 aa22.45■■□□□ 1.19
COPS7A-202ENST00000455113 RTFDC1Q9BY42 306 aaPredicted RBP22.45■■□□□ 1.19
COPS7A-202ENST00000455113 SRCIN1Q9C0H9 1055 aa22.45■■□□□ 1.19
COPS7A-202ENST00000455113 FZD9O00144 591 aa22.45■■□□□ 1.18
COPS7A-202ENST00000455113 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
COPS7A-202ENST00000455113 BCL2L13Q9BXK5 485 aa22.45■■□□□ 1.18
COPS7A-202ENST00000455113 SMC4Q9NTJ3 1288 aa22.45■■□□□ 1.18
COPS7A-202ENST00000455113 C9orf78Q9NZ63 289 aaPredicted RBP22.45■■□□□ 1.18
COPS7A-202ENST00000455113 IQCA1LA6NCM1 817 aa22.44■■□□□ 1.18
COPS7A-202ENST00000455113 AOC3Q16853 763 aa22.44■■□□□ 1.18
COPS7A-202ENST00000455113 SLC51AQ86UW1 340 aa22.44■■□□□ 1.18
COPS7A-202ENST00000455113 ALDH1L1O75891 902 aa22.43■■□□□ 1.18
COPS7A-202ENST00000455113 PLA2G12BQ9BX93 195 aa22.43■■□□□ 1.18
COPS7A-202ENST00000455113 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
COPS7A-202ENST00000455113 RBM46Q8TBY0 533 aaKnown RBP22.43■■□□□ 1.18
COPS7A-202ENST00000455113 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
COPS7A-202ENST00000455113 LRRC37AA6NMS7 1700 aa22.42■■□□□ 1.18
COPS7A-202ENST00000455113 C6orf229H3BNL8 230 aa22.42■■□□□ 1.18
COPS7A-202ENST00000455113 EYA3Q99504 573 aa22.42■■□□□ 1.18
COPS7A-202ENST00000455113 ZNF541Q9H0D2 1346 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 GRM8O00222 908 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 WASHC4Q2M389 1173 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 GPC2Q8N158 579 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 GREM2Q9H772 168 aa22.41■■□□□ 1.18
COPS7A-202ENST00000455113 IGHMBP2P38935 993 aaKnown RBP22.4■■□□□ 1.18
COPS7A-202ENST00000455113 CASP7P55210 303 aa22.4■■□□□ 1.18
COPS7A-202ENST00000455113 GPSM2P81274 684 aa22.4■■□□□ 1.18
COPS7A-202ENST00000455113 GJA3Q9Y6H8 435 aa22.4■■□□□ 1.18
COPS7A-202ENST00000455113 RTL9Q8NET4 1388 aa22.39■■□□□ 1.18
COPS7A-202ENST00000455113 SMC1BQ8NDV3 1235 aa22.39■■□□□ 1.17
COPS7A-202ENST00000455113 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-202ENST00000455113 ZNRF3Q9ULT6 936 aa22.39■■□□□ 1.17
COPS7A-202ENST00000455113 CHMP3Q9Y3E7 222 aa22.39■■□□□ 1.17
COPS7A-202ENST00000455113 ITGA6P23229 1130 aa22.38■■□□□ 1.17
COPS7A-202ENST00000455113 FSTL1Q12841 308 aa22.38■■□□□ 1.17
COPS7A-202ENST00000455113 MPHOSPH8Q99549 860 aa22.38■■□□□ 1.17
COPS7A-202ENST00000455113 SCN4AP35499 1836 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 G3V3G9 751 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 DCAF8Q5TAQ9 597 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 ZC3H12CQ9C0D7 883 aaKnown RBP22.37■■□□□ 1.17
COPS7A-202ENST00000455113 BSDC1Q9NW68 430 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-202ENST00000455113 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 GGA1Q9UJY5 639 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 RCAN3Q9UKA8 241 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 ANKRD18BA2A2Z9 1011 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 POTECB2RU33 542 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 CSF1RP07333 972 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 LMOD1P29536 600 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-202ENST00000455113 HACL1Q9UJ83 578 aa22.37■■□□□ 1.17
COPS7A-202ENST00000455113 XDHP47989 1333 aa22.36■■□□□ 1.17
COPS7A-202ENST00000455113 UFL1O94874 794 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms