RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 EID1Q9Y6B2 187 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 PIP4K2AP48426 406 aaPredicted RBP16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 KRT32Q14532 448 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 PRR36Q9H6K5 1346 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
UBE2D3-210ENST00000453744 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 GABPB1Q06547 395 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 PTPN21Q16825 1174 aa16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 EAF2Q96CJ1 260 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 ANKRD7Q92527 254 aa16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 ERO1AQ96HE7 468 aa16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 FUCA2Q9BTY2 467 aa16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
UBE2D3-210ENST00000453744 GPS2Q13227 327 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 CALCOCO1Q9P1Z2 691 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 AATKQ6ZMQ8 1374 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 CTAGE5O15320 804 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 HAND2P61296 217 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 FBXO38Q6PIJ6 1188 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 PGBD1Q96JS3 809 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 CHD1O14646 1710 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 TDRD7Q8NHU6 1098 aaKnown RBP16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 TAF6LQ9Y6J9 622 aa16.17■□□□□ 0.18
UBE2D3-210ENST00000453744 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 PDIA4P13667 645 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 SALL3Q9BXA9 1300 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 SLC3A2P08195 630 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 KMT5BQ4FZB7 885 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 MYD88Q99836 296 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 DDX41Q9UJV9 622 aaKnown RBP16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 METP08581 1390 aa16.16■□□□□ 0.18
UBE2D3-210ENST00000453744 APPP05067 770 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 GSDMDP57764 484 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 KIF2AO00139 706 aaPredicted RBP16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 TCHHQ07283 1943 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 NECTIN1Q15223 517 aa16.15■□□□□ 0.18
UBE2D3-210ENST00000453744 FLT4P35916 1363 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 GOLIM4O00461 696 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 CAVIN2O95810 425 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 MARCKSP29966 332 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.172e-9■■□□□ 12.2
UBE2D3-210ENST00000453744 PTPRMP28827 1452 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 GRM8O00222 908 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 BEND3Q5T5X7 828 aa16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
UBE2D3-210ENST00000453744 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 PSME1Q06323 249 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 MRPS27Q92552 414 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 XPO4Q9C0E2 1151 aaKnown RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 UHRF1BP1LA0JNW5 1464 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 SUCLG2Q96I99 432 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 C8orf76Q96K31 380 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 CCDC85AQ96PX6 553 aaPredicted RBP16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 HMG20BQ9P0W2 317 aa16.13■□□□□ 0.17
UBE2D3-210ENST00000453744 TERF2Q15554 542 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 AMOTL2Q9Y2J4 779 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 YEATS2Q9ULM3 1422 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 SLC39A6Q13433 755 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 U3KPZ7 1027 aaPredicted RBP16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 GNG11P61952 73 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 PLA2G4DQ86XP0 818 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
UBE2D3-210ENST00000453744 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 CARD6Q9BX69 1037 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 ATP7BP35670 1465 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 ELP1O95163 1332 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 CHGBP05060 677 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 FAM160A1Q05DH4 1040 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 GOLGA8FQ08AF8 430 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 GOLGA8DPQ0D2H9 430 aa16.11■□□□□ 0.17
UBE2D3-210ENST00000453744 UBE3BQ7Z3V4 1068 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms