RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 CCDC83Q8IWF9 413 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 HAUS7Q99871 368 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 MTMR6Q9Y217 621 aa25.35■■□□□ 1.65
PUF60-203ENST00000453551 TAF5LO75529 589 aa25.34■■□□□ 1.65
PUF60-203ENST00000453551 GJB2P29033 226 aa25.34■■□□□ 1.65
PUF60-203ENST00000453551 FOXO4P98177 505 aa25.34■■□□□ 1.65
PUF60-203ENST00000453551 KRT32Q14532 448 aa25.34■■□□□ 1.65
PUF60-203ENST00000453551 SHANK3Q9BYB0 1731 aa25.34■■□□□ 1.65
PUF60-203ENST00000453551 RPS6KB1P23443 525 aa25.33■■□□□ 1.65
PUF60-203ENST00000453551 ME3Q16798 604 aa25.33■■□□□ 1.65
PUF60-203ENST00000453551 UBE2HP62256 183 aa25.33■■□□□ 1.64
PUF60-203ENST00000453551 BLOC1S2Q6QNY1 142 aa25.33■■□□□ 1.64
PUF60-203ENST00000453551 ZSCAN30Q86W11 494 aa25.33■■□□□ 1.64
PUF60-203ENST00000453551 CARD10Q9BWT7 1032 aa25.33■■□□□ 1.64
PUF60-203ENST00000453551 TSPY26PQ9H489 355 aa25.33■■□□□ 1.64
PUF60-203ENST00000453551 GADD45BO75293 160 aaPredicted RBP25.32■■□□□ 1.64
PUF60-203ENST00000453551 LETM1O95202 739 aaPredicted RBP25.32■■□□□ 1.64
PUF60-203ENST00000453551 PRDM11Q9NQV5 511 aa25.32■■□□□ 1.64
PUF60-203ENST00000453551 CWC25Q9NXE8 425 aaPredicted RBP25.32■■□□□ 1.64
PUF60-203ENST00000453551 ATP5J2-PTCD1G3V325 749 aa25.31■■□□□ 1.64
PUF60-203ENST00000453551 PTCD1O75127 700 aaKnown RBP25.31■■□□□ 1.64
PUF60-203ENST00000453551 PIP4K2AP48426 406 aaPredicted RBP25.31■■□□□ 1.64
PUF60-203ENST00000453551 TPCN1Q9ULQ1 816 aa25.31■■□□□ 1.64
PUF60-203ENST00000453551 PALLDQ8WX93 1383 aa25.31■■□□□ 1.64
PUF60-203ENST00000453551 CCDC183Q5T5S1 534 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 ZNF589Q86UQ0 364 aaPredicted RBP25.3■■□□□ 1.64
PUF60-203ENST00000453551 ATG3Q9NT62 314 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 CNPY2Q9Y2B0 182 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 LMBR1LQ6UX01 489 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 TOM1L2Q6ZVM7 507 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 CCDC191Q8NCU4 936 aa25.3■■□□□ 1.64
PUF60-203ENST00000453551 U3KPZ7 1027 aaPredicted RBP25.3■■□□□ 1.64
PUF60-203ENST00000453551 SH3TC1Q8TE82 1336 aa25.29■■□□□ 1.64
PUF60-203ENST00000453551 FAM184AQ8NB25 1140 aa25.29■■□□□ 1.64
PUF60-203ENST00000453551 DBNDD2Q9BQY9 259 aa25.29■■□□□ 1.64
PUF60-203ENST00000453551 LARP6Q9BRS8 491 aaKnown RBP25.29■■□□□ 1.64
PUF60-203ENST00000453551 SPEF2Q9C093 1822 aa25.29■■□□□ 1.64
PUF60-203ENST00000453551 ZNF609O15014 1411 aa25.28■■□□□ 1.64
PUF60-203ENST00000453551 IL2RBP14784 551 aa25.28■■□□□ 1.64
PUF60-203ENST00000453551 PDCP20941 246 aa25.28■■□□□ 1.64
PUF60-203ENST00000453551 GDPD2Q9HCC8 539 aa25.28■■□□□ 1.64
PUF60-203ENST00000453551 IL15P40933 162 aaPredicted RBP25.28■■□□□ 1.64
PUF60-203ENST00000453551 ATG9AQ7Z3C6 839 aa25.28■■□□□ 1.64
PUF60-203ENST00000453551 JARID2Q92833 1246 aaPredicted RBP25.28■■□□□ 1.64
PUF60-203ENST00000453551 TCHHQ07283 1943 aa25.27■■□□□ 1.64
PUF60-203ENST00000453551 CIAO1O76071 339 aa25.27■■□□□ 1.64
PUF60-203ENST00000453551 UVSSAQ2YD98 709 aa25.27■■□□□ 1.64
PUF60-203ENST00000453551 KBTBD3Q8NAB2 608 aa25.27■■□□□ 1.64
PUF60-203ENST00000453551 TOB2Q14106 344 aaPredicted RBP25.26■■□□□ 1.63
PUF60-203ENST00000453551 MCMDC2Q4G0Z9 681 aa25.26■■□□□ 1.63
PUF60-203ENST00000453551 TTLL7Q6ZT98 887 aa25.26■■□□□ 1.63
PUF60-203ENST00000453551 EDC3Q96F86 508 aaKnown RBP25.25■■□□□ 1.63
PUF60-203ENST00000453551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.24■■□□□ 1.63
PUF60-203ENST00000453551 FBXO3Q9UK99 471 aa25.24■■□□□ 1.63
PUF60-203ENST00000453551 ISCA1Q9BUE6 129 aa25.23■■□□□ 1.63
PUF60-203ENST00000453551 HELLSQ9NRZ9 838 aa25.23■■□□□ 1.63
PUF60-203ENST00000453551 NOL7Q9UMY1 257 aaKnown RBP25.23■■□□□ 1.63
PUF60-203ENST00000453551 MCM5P33992 734 aa25.23■■□□□ 1.63
PUF60-203ENST00000453551 FOXD4L6Q3SYB3 417 aaPredicted RBP25.23■■□□□ 1.63
PUF60-203ENST00000453551 FOXD4L3Q6VB84 417 aaPredicted RBP25.23■■□□□ 1.63
PUF60-203ENST00000453551 NECAB1Q8N987 351 aa25.23■■□□□ 1.63
PUF60-203ENST00000453551 ANO8Q9HCE9 1232 aaPredicted RBP25.23■■□□□ 1.63
PUF60-203ENST00000453551 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
PUF60-203ENST00000453551 EYA2O00167 538 aa25.22■■□□□ 1.63
PUF60-203ENST00000453551 TRIM28Q13263 835 aaKnown RBP25.22■■□□□ 1.63
PUF60-203ENST00000453551 ELP1O95163 1332 aa25.22■■□□□ 1.63
PUF60-203ENST00000453551 A1BGP04217 495 aa25.21■■□□□ 1.63
PUF60-203ENST00000453551 NEK1Q96PY6 1258 aa25.21■■□□□ 1.63
PUF60-203ENST00000453551 TAF6LQ9Y6J9 622 aa25.21■■□□□ 1.63
PUF60-203ENST00000453551 LARP1BQ659C4 914 aaKnown RBP25.21■■□□□ 1.63
PUF60-203ENST00000453551 DNAJC2Q99543 621 aaKnown RBP25.21■■□□□ 1.63
PUF60-203ENST00000453551 SLAIN2Q9P270 581 aa25.21■■□□□ 1.63
PUF60-203ENST00000453551 FIBPO43427 364 aa25.2■■□□□ 1.62
PUF60-203ENST00000453551 DNM1Q05193 864 aaKnown RBP25.2■■□□□ 1.62
PUF60-203ENST00000453551 DDX54Q8TDD1 881 aaKnown RBP25.2■■□□□ 1.62
PUF60-203ENST00000453551 DSCC1Q9BVC3 393 aa25.2■■□□□ 1.62
PUF60-203ENST00000453551 NHSL1Q5SYE7 1610 aa25.2■■□□□ 1.62
PUF60-203ENST00000453551 STRCQ7RTU9 1775 aa25.2■■□□□ 1.62
PUF60-203ENST00000453551 VSIG10Q8N0Z9 540 aa25.19■■□□□ 1.62
PUF60-203ENST00000453551 CCDC39Q9UFE4 941 aa25.19■■□□□ 1.62
PUF60-203ENST00000453551 HMGB1P09429 215 aaKnown RBP25.19■■□□□ 1.62
PUF60-203ENST00000453551 MSNP26038 577 aaKnown RBP25.19■■□□□ 1.62
PUF60-203ENST00000453551 HSPA2P54652 639 aa25.19■■□□□ 1.62
PUF60-203ENST00000453551 COL9A3Q14050 684 aaPredicted RBP25.19■■□□□ 1.62
PUF60-203ENST00000453551 PLA2G12BQ9BX93 195 aa25.19■■□□□ 1.62
PUF60-203ENST00000453551 TEX13AQ9BXU3 409 aaPredicted RBP25.19■■□□□ 1.62
PUF60-203ENST00000453551 PAG1Q9NWQ8 432 aa25.19■■□□□ 1.62
PUF60-203ENST00000453551 VPS37CA5D8V6 355 aaPredicted RBP25.18■■□□□ 1.62
PUF60-203ENST00000453551 KRT85P78386 507 aa25.18■■□□□ 1.62
PUF60-203ENST00000453551 ZMYM1Q5SVZ6 1142 aa25.18■■□□□ 1.62
PUF60-203ENST00000453551 GTF3C6Q969F1 213 aa25.18■■□□□ 1.62
PUF60-203ENST00000453551 ZNF500O60304 480 aaPredicted RBP25.17■■□□□ 1.62
PUF60-203ENST00000453551 CHMP3Q9Y3E7 222 aa25.17■■□□□ 1.62
PUF60-203ENST00000453551 TCIRG1Q13488 830 aa25.16■■□□□ 1.62
PUF60-203ENST00000453551 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
PUF60-203ENST00000453551 CYP21A2P08686 494 aa25.16■■□□□ 1.62
PUF60-203ENST00000453551 FUCA2Q9BTY2 467 aa25.16■■□□□ 1.62
PUF60-203ENST00000453551 ZBTB3Q9H5J0 574 aa25.16■■□□□ 1.62
PUF60-203ENST00000453551 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.16■■□□□ 1.62
PUF60-203ENST00000453551 RNF214Q8ND24 703 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms