RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 TMC4Q7Z404 712 aa24.69■■□□□ 1.54
SNX11-203ENST00000452859 GRAPLQ8TC17 118 aaPredicted RBP24.69■■□□□ 1.54
SNX11-203ENST00000452859 UBE3BQ7Z3V4 1068 aa24.68■■□□□ 1.54
SNX11-203ENST00000452859 DDX60Q8IY21 1712 aaKnown RBP24.68■■□□□ 1.54
SNX11-203ENST00000452859 FKBP4Q02790 459 aaKnown RBP eCLIP24.68■■□□□ 1.54
SNX11-203ENST00000452859 ATP6V0A2Q9Y487 856 aa24.68■■□□□ 1.54
SNX11-203ENST00000452859 ALDH1L1O75891 902 aa24.67■■□□□ 1.54
SNX11-203ENST00000452859 SRCIN1Q9C0H9 1055 aa24.67■■□□□ 1.54
SNX11-203ENST00000452859 LAMB2P55268 1798 aa24.66■■□□□ 1.54
SNX11-203ENST00000452859 ZC3H4Q9UPT8 1303 aaKnown RBP24.66■■□□□ 1.54
SNX11-203ENST00000452859 FER1L6Q2WGJ9 1857 aa24.65■■□□□ 1.54
SNX11-203ENST00000452859 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
SNX11-203ENST00000452859 OLFM4Q6UX06 510 aa24.65■■□□□ 1.54
SNX11-203ENST00000452859 SP8Q8IXZ3 490 aa24.65■■□□□ 1.54
SNX11-203ENST00000452859 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.54
SNX11-203ENST00000452859 CTSWP56202 376 aa24.64■■□□□ 1.54
SNX11-203ENST00000452859 PSMD1Q99460 953 aa24.64■■□□□ 1.54
SNX11-203ENST00000452859 C9orf78Q9NZ63 289 aaPredicted RBP24.64■■□□□ 1.54
SNX11-203ENST00000452859 SBF1O95248 1867 aa24.63■■□□□ 1.53
SNX11-203ENST00000452859 RPS8P62241 208 aaKnown RBP24.63■■□□□ 1.53
SNX11-203ENST00000452859 GPBP1L1Q9HC44 474 aaPredicted RBP24.63■■□□□ 1.53
SNX11-203ENST00000452859 GRM8O00222 908 aa24.62■■□□□ 1.53
SNX11-203ENST00000452859 PLA2G12BQ9BX93 195 aa24.62■■□□□ 1.53
SNX11-203ENST00000452859 KIF16BQ96L93 1317 aa24.62■■□□□ 1.53
SNX11-203ENST00000452859 PRELPP51888 382 aa24.61■■□□□ 1.53
SNX11-203ENST00000452859 TTLL11Q8NHH1 800 aa24.61■■□□□ 1.53
SNX11-203ENST00000452859 ZNF526Q8TF50 670 aaPredicted RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 CELF1Q92879 486 aaKnown RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 API5Q9BZZ5 524 aaKnown RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 NOB1Q9ULX3 412 aaKnown RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 CASP7P55210 303 aa24.61■■□□□ 1.53
SNX11-203ENST00000452859 SUPT20HQ8NEM7 779 aa24.61■■□□□ 1.53
SNX11-203ENST00000452859 CCDC85AQ96PX6 553 aaPredicted RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 CDC5LQ99459 802 aaKnown RBP24.61■■□□□ 1.53
SNX11-203ENST00000452859 MPNDQ8N594 471 aa24.6■■□□□ 1.53
SNX11-203ENST00000452859 ZNF277Q9NRM2 450 aaPredicted RBP24.6■■□□□ 1.53
SNX11-203ENST00000452859 KDM2BQ8NHM5 1336 aa24.59■■□□□ 1.53
SNX11-203ENST00000452859 DPP8Q6V1X1 898 aaPredicted RBP24.59■■□□□ 1.53
SNX11-203ENST00000452859 SEC31BQ9NQW1 1179 aa24.59■■□□□ 1.53
SNX11-203ENST00000452859 IPO8O15397 1037 aaKnown RBP24.58■■□□□ 1.53
SNX11-203ENST00000452859 IARSP41252 1262 aaKnown RBP24.58■■□□□ 1.53
SNX11-203ENST00000452859 DPY19L2Q6NUT2 758 aa24.58■■□□□ 1.53
SNX11-203ENST00000452859 ANKRD18AQ8IVF6 992 aa24.58■■□□□ 1.53
SNX11-203ENST00000452859 ARHGAP45Q92619 1136 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 SNED1Q8TER0 1413 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 CCDC88AQ3V6T2 1871 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 RTL9Q8NET4 1388 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 JDP2Q8WYK2 163 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 VPS33BQ9H267 617 aa24.57■■□□□ 1.52
SNX11-203ENST00000452859 CCT4P50991 539 aaKnown RBP24.56■■□□□ 1.52
SNX11-203ENST00000452859 GREM2Q9H772 168 aa24.56■■□□□ 1.52
SNX11-203ENST00000452859 CSF1RP07333 972 aa24.55■■□□□ 1.52
SNX11-203ENST00000452859 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
SNX11-203ENST00000452859 NSFL1CQ9UNZ2 370 aaKnown RBP24.54■■□□□ 1.52
SNX11-203ENST00000452859 MYH3P11055 1940 aa24.54■■□□□ 1.52
SNX11-203ENST00000452859 TAF1P21675 1872 aa24.54■■□□□ 1.52
SNX11-203ENST00000452859 GLTPD2A6NH11 291 aa24.53■■□□□ 1.52
SNX11-203ENST00000452859 IGHMBP2P38935 993 aaKnown RBP24.53■■□□□ 1.52
SNX11-203ENST00000452859 LARGE2Q8N3Y3 721 aa24.53■■□□□ 1.52
SNX11-203ENST00000452859 ITGA6P23229 1130 aa24.53■■□□□ 1.52
SNX11-203ENST00000452859 CHMP3Q9Y3E7 222 aa24.53■■□□□ 1.52
SNX11-203ENST00000452859 DICER1Q9UPY3 1922 aaKnown RBP24.52■■□□□ 1.52
SNX11-203ENST00000452859 UTYO14607 1347 aa24.52■■□□□ 1.52
SNX11-203ENST00000452859 PPIP5K2O43314 1243 aa24.52■■□□□ 1.52
SNX11-203ENST00000452859 BCAR3O75815 825 aa24.52■■□□□ 1.52
SNX11-203ENST00000452859 FOXO4P98177 505 aa24.52■■□□□ 1.52
SNX11-203ENST00000452859 SLC51AQ86UW1 340 aa24.52■■□□□ 1.52
SNX11-203ENST00000452859 FRAT1Q92837 279 aaPredicted RBP24.52■■□□□ 1.52
SNX11-203ENST00000452859 ANKRD18BA2A2Z9 1011 aa24.51■■□□□ 1.51
SNX11-203ENST00000452859 NBPF7P0C2Y1 421 aaPredicted RBP24.51■■□□□ 1.51
SNX11-203ENST00000452859 IFIT5Q13325 482 aaKnown RBP24.51■■□□□ 1.51
SNX11-203ENST00000452859 FAM161AQ3B820 660 aa24.51■■□□□ 1.51
SNX11-203ENST00000452859 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
SNX11-203ENST00000452859 ANKIB1Q9P2G1 1089 aa24.51■■□□□ 1.51
SNX11-203ENST00000452859 TIAM2Q8IVF5 1701 aa24.51■■□□□ 1.51
SNX11-203ENST00000452859 LMBR1LQ6UX01 489 aa24.5■■□□□ 1.51
SNX11-203ENST00000452859 MPHOSPH8Q99549 860 aa24.5■■□□□ 1.51
SNX11-203ENST00000452859 C6orf229H3BNL8 230 aa24.5■■□□□ 1.51
SNX11-203ENST00000452859 GPSM2P81274 684 aa24.5■■□□□ 1.51
SNX11-203ENST00000452859 NIM1KQ8IY84 436 aa24.5■■□□□ 1.51
SNX11-203ENST00000452859 CCDC57Q2TAC2 916 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 ATF7IPQ6VMQ6 1270 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 EYA3Q99504 573 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 USP44Q9H0E7 712 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 PODXL2Q9NZ53 605 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 HDAC5Q9UQL6 1122 aa24.49■■□□□ 1.51
SNX11-203ENST00000452859 LRRC37AA6NMS7 1700 aa24.48■■□□□ 1.51
SNX11-203ENST00000452859 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
SNX11-203ENST00000452859 AOC3Q16853 763 aa24.48■■□□□ 1.51
SNX11-203ENST00000452859 SUCLG2Q96I99 432 aa24.48■■□□□ 1.51
SNX11-203ENST00000452859 FZD9O00144 591 aa24.47■■□□□ 1.51
SNX11-203ENST00000452859 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
SNX11-203ENST00000452859 WASHC4Q2M389 1173 aa24.47■■□□□ 1.51
SNX11-203ENST00000452859 EPHA10Q5JZY3 1008 aa24.47■■□□□ 1.51
SNX11-203ENST00000452859 ZKSCAN2Q63HK3 967 aa24.47■■□□□ 1.51
SNX11-203ENST00000452859 TAF7LQ5H9L4 462 aa24.46■■□□□ 1.51
SNX11-203ENST00000452859 NMRK2Q9NPI5 230 aa24.46■■□□□ 1.51
SNX11-203ENST00000452859 GGA1Q9UJY5 639 aa24.46■■□□□ 1.51
SNX11-203ENST00000452859 XDHP47989 1333 aa24.46■■□□□ 1.51
SNX11-203ENST00000452859 TRIM27P14373 513 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms