RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 RTFDC1Q9BY42 306 aaPredicted RBP21.6■■□□□ 1.05
PTMA-208ENST00000448874 VPS33BQ9H267 617 aa21.6■■□□□ 1.05
PTMA-208ENST00000448874 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
PTMA-208ENST00000448874 TMEM88BA6NKF7 163 aa21.59■■□□□ 1.05
PTMA-208ENST00000448874 LRRC37AA6NMS7 1700 aa21.59■■□□□ 1.05
PTMA-208ENST00000448874 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
PTMA-208ENST00000448874 CNTROBQ8N137 903 aa21.59■■□□□ 1.05
PTMA-208ENST00000448874 EPS15P42566 896 aa21.58■■□□□ 1.05
PTMA-208ENST00000448874 GNAI1P63096 354 aa21.58■■□□□ 1.05
PTMA-208ENST00000448874 MPNDQ8N594 471 aa21.58■■□□□ 1.05
PTMA-208ENST00000448874 FAM89AQ96GI7 184 aa21.58■■□□□ 1.05
PTMA-208ENST00000448874 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
PTMA-208ENST00000448874 ZNRF3Q9ULT6 936 aa21.57■■□□□ 1.04
PTMA-208ENST00000448874 ELL2O00472 640 aaPredicted RBP21.56■■□□□ 1.04
PTMA-208ENST00000448874 KIAA2012Q0VF49 1180 aa21.56■■□□□ 1.04
PTMA-208ENST00000448874 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
PTMA-208ENST00000448874 CXCL9Q07325 125 aa21.55■■□□□ 1.04
PTMA-208ENST00000448874 GOLGA2Q08379 1002 aa21.55■■□□□ 1.04
PTMA-208ENST00000448874 TMC4Q7Z404 712 aa21.55■■□□□ 1.04
PTMA-208ENST00000448874 RIC3Q7Z5B4 369 aa21.55■■□□□ 1.04
PTMA-208ENST00000448874 PHAXQ9H814 394 aaKnown RBP21.55■■□□□ 1.04
PTMA-208ENST00000448874 COL4A1P02462 1669 aa21.54■■□□□ 1.04
PTMA-208ENST00000448874 TRIM28Q13263 835 aaKnown RBP21.54■■□□□ 1.04
PTMA-208ENST00000448874 SF3B3Q15393 1217 aaKnown RBP21.54■■□□□ 1.04
PTMA-208ENST00000448874 USP50Q70EL3 339 aaPredicted RBP21.54■■□□□ 1.04
PTMA-208ENST00000448874 CELF1Q92879 486 aaKnown RBP21.54■■□□□ 1.04
PTMA-208ENST00000448874 GPRC5DQ9NZD1 345 aa21.54■■□□□ 1.04
PTMA-208ENST00000448874 IRS4O14654 1257 aaPredicted RBP21.52■■□□□ 1.04
PTMA-208ENST00000448874 VEGFBP49765 207 aa21.52■■□□□ 1.04
PTMA-208ENST00000448874 CIAPIN1Q6FI81 312 aa21.52■■□□□ 1.04
PTMA-208ENST00000448874 TNS4Q8IZW8 715 aa21.52■■□□□ 1.04
PTMA-208ENST00000448874 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
PTMA-208ENST00000448874 ADARB2Q9NS39 739 aaKnown RBP21.52■■□□□ 1.04
PTMA-208ENST00000448874 GMPSP49915 693 aaPredicted RBP21.51■■□□□ 1.03
PTMA-208ENST00000448874 MYD88Q99836 296 aa21.51■■□□□ 1.03
PTMA-208ENST00000448874 RAD17O75943 681 aa21.5■■□□□ 1.03
PTMA-208ENST00000448874 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
PTMA-208ENST00000448874 ABT1Q9ULW3 272 aaKnown RBP21.5■■□□□ 1.03
PTMA-208ENST00000448874 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
PTMA-208ENST00000448874 RASSF10A6NK89 507 aa21.49■■□□□ 1.03
PTMA-208ENST00000448874 YDJCA8MPS7 323 aa21.49■■□□□ 1.03
PTMA-208ENST00000448874 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.03
PTMA-208ENST00000448874 ZBTB38Q8NAP3 1195 aaPredicted RBP21.49■■□□□ 1.03
PTMA-208ENST00000448874 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
PTMA-208ENST00000448874 NSFL1CQ9UNZ2 370 aaKnown RBP21.49■■□□□ 1.03
PTMA-208ENST00000448874 CDHR2Q9BYE9 1310 aa21.49■■□□□ 1.03
PTMA-208ENST00000448874 TNIP1Q15025 636 aa21.48■■□□□ 1.03
PTMA-208ENST00000448874 DEFB115Q30KQ5 88 aa21.48■■□□□ 1.03
PTMA-208ENST00000448874 CCDC30Q5VVM6 783 aa21.48■■□□□ 1.03
PTMA-208ENST00000448874 TRAF5O00463 557 aa21.47■■□□□ 1.03
PTMA-208ENST00000448874 GPSM2P81274 684 aa21.47■■□□□ 1.03
PTMA-208ENST00000448874 WASHC4Q2M389 1173 aa21.47■■□□□ 1.03
PTMA-208ENST00000448874 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
PTMA-208ENST00000448874 CCDC191Q8NCU4 936 aa21.47■■□□□ 1.03
PTMA-208ENST00000448874 TSR2Q969E8 191 aaKnown RBP21.47■■□□□ 1.03
PTMA-208ENST00000448874 C6orf229H3BNL8 230 aa21.46■■□□□ 1.03
PTMA-208ENST00000448874 FOXN1O15353 648 aa21.46■■□□□ 1.03
PTMA-208ENST00000448874 DDX58O95786 925 aaKnown RBP21.46■■□□□ 1.03
PTMA-208ENST00000448874 CHMP4AQ9BY43 222 aa21.46■■□□□ 1.03
PTMA-208ENST00000448874 RIMBP2O15034 1052 aa21.45■■□□□ 1.02
PTMA-208ENST00000448874 PCCAP05165 728 aaPredicted RBP21.45■■□□□ 1.02
PTMA-208ENST00000448874 HSP90B1P14625 803 aaKnown RBP21.45■■□□□ 1.02
PTMA-208ENST00000448874 RPS8P62241 208 aaKnown RBP21.45■■□□□ 1.02
PTMA-208ENST00000448874 METTL22Q9BUU2 404 aaPredicted RBP21.45■■□□□ 1.02
PTMA-208ENST00000448874 DBNDD1Q9H9R9 158 aa21.45■■□□□ 1.02
PTMA-208ENST00000448874 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
PTMA-208ENST00000448874 CWC25Q9NXE8 425 aaPredicted RBP21.45■■□□□ 1.02
PTMA-208ENST00000448874 POLLQ9UGP5 575 aa21.45■■□□□ 1.02
PTMA-208ENST00000448874 TRPM4Q8TD43 1214 aa21.44■■□□□ 1.02
PTMA-208ENST00000448874 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
PTMA-208ENST00000448874 AIDAQ96BJ3 306 aa21.44■■□□□ 1.02
PTMA-208ENST00000448874 GPR101Q96P66 508 aaPredicted RBP21.44■■□□□ 1.02
PTMA-208ENST00000448874 CNOT7Q9UIV1 285 aaKnown RBP21.44■■□□□ 1.02
PTMA-208ENST00000448874 WDR33Q9C0J8 1336 aaKnown RBP21.44■■□□□ 1.02
PTMA-208ENST00000448874 SHTN1A0MZ66 631 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 CAPN15O75808 1086 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 CCDC27Q2M243 656 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 CCDC152Q4G0S7 254 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 CST9Q5W186 159 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 EYA3Q99504 573 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
PTMA-208ENST00000448874 ZBTB12Q9Y330 459 aaPredicted RBP21.43■■□□□ 1.02
PTMA-208ENST00000448874 PSMD14O00487 310 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 ECE2O60344 883 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 PDE8AO60658 829 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 HIRAP54198 1017 aaPredicted RBP21.42■■□□□ 1.02
PTMA-208ENST00000448874 PAXIP1Q6ZW49 1069 aaPredicted RBP21.42■■□□□ 1.02
PTMA-208ENST00000448874 WWC1Q8IX03 1113 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 MICALL2Q8IY33 904 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 TBC1D16Q8TBP0 767 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 CCDC85AQ96PX6 553 aaPredicted RBP21.42■■□□□ 1.02
PTMA-208ENST00000448874 THSD7BQ9C0I4 1608 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 WBP1LQ9NX94 342 aa21.42■■□□□ 1.02
PTMA-208ENST00000448874 KSR2Q6VAB6 950 aa21.41■■□□□ 1.02
PTMA-208ENST00000448874 STK31Q9BXU1 1019 aa21.41■■□□□ 1.02
PTMA-208ENST00000448874 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
PTMA-208ENST00000448874 PGAP2Q9UHJ9 254 aa21.41■■□□□ 1.02
PTMA-208ENST00000448874 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 H7C1D1 291 aa21.4■■□□□ 1.02
PTMA-208ENST00000448874 CTCFP49711 727 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms