RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 COG6Q9Y2V7 657 aa18.46■□□□□ 0.55
CDK3-202ENST00000448471 GJA3Q9Y6H8 435 aa18.46■□□□□ 0.55
CDK3-202ENST00000448471 TRIM27P14373 513 aa18.45■□□□□ 0.54
CDK3-202ENST00000448471 LMOD1P29536 600 aaPredicted RBP18.45■□□□□ 0.54
CDK3-202ENST00000448471 CRY2Q49AN0 593 aa18.45■□□□□ 0.54
CDK3-202ENST00000448471 MRPL50Q8N5N7 158 aaKnown RBP18.45■□□□□ 0.54
CDK3-202ENST00000448471 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
CDK3-202ENST00000448471 COL4A5P29400 1685 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 NUTM1Q86Y26 1132 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 FTSJ3Q8IY81 847 aaKnown RBP18.44■□□□□ 0.54
CDK3-202ENST00000448471 CLUAP1Q96AJ1 413 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 TSPYL4Q9UJ04 414 aa18.44■□□□□ 0.54
CDK3-202ENST00000448471 MVPQ14764 893 aaKnown RBP18.43■□□□□ 0.54
CDK3-202ENST00000448471 TAF7Q15545 349 aaPredicted RBP18.43■□□□□ 0.54
CDK3-202ENST00000448471 PAXIP1Q6ZW49 1069 aaPredicted RBP18.43■□□□□ 0.54
CDK3-202ENST00000448471 NYXQ9GZU5 481 aa18.43■□□□□ 0.54
CDK3-202ENST00000448471 THSD7BQ9C0I4 1608 aa18.43■□□□□ 0.54
CDK3-202ENST00000448471 FMR1Q06787 632 aaKnown RBP eCLIP18.42■□□□□ 0.54
CDK3-202ENST00000448471 FAM161AQ3B820 660 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
CDK3-202ENST00000448471 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 EPS15P42566 896 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 SCNN1DP51172 638 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 LARGE2Q8N3Y3 721 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 CAPNS2Q96L46 248 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 TSHZ2Q9NRE2 1034 aa18.42■□□□□ 0.54
CDK3-202ENST00000448471 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
CDK3-202ENST00000448471 ECE1P42892 770 aa18.41■□□□□ 0.54
CDK3-202ENST00000448471 GRM1Q13255 1194 aa18.41■□□□□ 0.54
CDK3-202ENST00000448471 CYP4F22Q6NT55 531 aa18.41■□□□□ 0.54
CDK3-202ENST00000448471 RPGRQ92834 1020 aaKnown RBP18.41■□□□□ 0.54
CDK3-202ENST00000448471 LAMB4A4D0S4 1761 aa18.4■□□□□ 0.54
CDK3-202ENST00000448471 SLC34A2O95436 690 aa18.4■□□□□ 0.54
CDK3-202ENST00000448471 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
CDK3-202ENST00000448471 BEGAINQ9BUH8 593 aa18.4■□□□□ 0.54
CDK3-202ENST00000448471 ERVV-1B6SEH8 477 aa18.39■□□□□ 0.53
CDK3-202ENST00000448471 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
CDK3-202ENST00000448471 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
CDK3-202ENST00000448471 GPR101Q96P66 508 aaPredicted RBP18.39■□□□□ 0.53
CDK3-202ENST00000448471 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
CDK3-202ENST00000448471 RIC1Q4ADV7 1423 aa18.39■□□□□ 0.53
CDK3-202ENST00000448471 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 MIS18AQ9NYP9 233 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 TRAF5O00463 557 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
CDK3-202ENST00000448471 PPEF1O14829 653 aaPredicted RBP18.38■□□□□ 0.53
CDK3-202ENST00000448471 CST9Q5W186 159 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 KIF6Q6ZMV9 814 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
CDK3-202ENST00000448471 TLL2Q9Y6L7 1015 aa18.38■□□□□ 0.53
CDK3-202ENST00000448471 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
CDK3-202ENST00000448471 UBN2Q6ZU65 1347 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 CCDC85CA6NKD9 419 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 GPTP24298 496 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 TTLL7Q6ZT98 887 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 RBM17Q96I25 401 aaKnown RBP18.37■□□□□ 0.53
CDK3-202ENST00000448471 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
CDK3-202ENST00000448471 SUSD4Q5VX71 490 aa18.36■□□□□ 0.53
CDK3-202ENST00000448471 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
CDK3-202ENST00000448471 ABCC4O15439 1325 aa18.35■□□□□ 0.53
CDK3-202ENST00000448471 PPIP5K2O43314 1243 aa18.35■□□□□ 0.53
CDK3-202ENST00000448471 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
CDK3-202ENST00000448471 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
CDK3-202ENST00000448471 NUP98P52948 1817 aa18.35■□□□□ 0.53
CDK3-202ENST00000448471 MYL6BP14649 208 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 ADARB2Q9NS39 739 aaKnown RBP18.34■□□□□ 0.53
CDK3-202ENST00000448471 TSKSQ9UJT2 592 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 PTPRCP08575 1304 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 AOC2O75106 756 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 NTSR2O95665 410 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 MAP2K2P36507 400 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 MLLT1Q03111 559 aaPredicted RBP18.34■□□□□ 0.53
CDK3-202ENST00000448471 AOC3Q16853 763 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 ITPRIPQ8IWB1 547 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 GPRC5DQ9NZD1 345 aa18.34■□□□□ 0.53
CDK3-202ENST00000448471 TRPM7Q96QT4 1865 aa18.33■□□□□ 0.53
CDK3-202ENST00000448471 KDM3BQ7LBC6 1761 aa18.33■□□□□ 0.52
CDK3-202ENST00000448471 HOXB7P09629 217 aa18.33■□□□□ 0.52
CDK3-202ENST00000448471 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
CDK3-202ENST00000448471 ZNF34Q8IZ26 560 aa18.33■□□□□ 0.52
CDK3-202ENST00000448471 TMX4Q9H1E5 349 aaPredicted RBP18.32■□□□□ 0.52
CDK3-202ENST00000448471 ZBTB40Q9NUA8 1239 aa18.32■□□□□ 0.52
CDK3-202ENST00000448471 CELF2O95319 508 aaKnown RBP18.31■□□□□ 0.52
CDK3-202ENST00000448471 RGS19P49795 217 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
CDK3-202ENST00000448471 CCDC30Q5VVM6 783 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
CDK3-202ENST00000448471 PPP1R42Q7Z4L9 355 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 SAPCD2Q86UD0 394 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 VPS33BQ9H267 617 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 PCDHB15Q9Y5E8 787 aa18.31■□□□□ 0.52
CDK3-202ENST00000448471 CXCL9Q07325 125 aa18.3■□□□□ 0.52
CDK3-202ENST00000448471 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
CDK3-202ENST00000448471 ZNRF3Q9ULT6 936 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms