RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 MAP2P11137 1827 aaKnown RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 RIOK3O14730 519 aaKnown RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 ZNF622Q969S3 477 aaKnown RBP eCLIP6.47□□□□□ -1.37
LMO3-209ENST00000447609 TRMT112Q9UI30 125 aaKnown RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 ATRNO75882 1429 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 MEGF6O75095 1541 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 NHSL1Q5SYE7 1610 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 APBB1O00213 710 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 ERC2O15083 957 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 KDM4AO75164 1064 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 CD2BP2O95400 341 aaKnown RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 BRPF1P55201 1214 aaPredicted RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 PLCB2Q00722 1185 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 CTR9Q6PD62 1173 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 ANKRD13DQ6ZTN6 518 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 USP26Q9BXU7 913 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 PIK3C2AO00443 1686 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 COL14A1Q05707 1796 aaKnown RBP6.47□□□□□ -1.37
LMO3-209ENST00000447609 KIF20BQ96Q89 1820 aa6.47□□□□□ -1.37
LMO3-209ENST00000447609 KIF2AO00139 706 aaPredicted RBP6.46□□□□□ -1.37
LMO3-209ENST00000447609 U2AF2P26368 475 aaKnown RBP eCLIP6.46□□□□□ -1.37
LMO3-209ENST00000447609 IRX3P78415 501 aaPredicted RBP6.46□□□□□ -1.37
LMO3-209ENST00000447609 ST5P78524 1137 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 TTC22Q5TAA0 569 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 PPP1R42Q7Z4L9 355 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 C8orf58Q8NAV2 365 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 ZNF397Q8NF99 534 aaPredicted RBP6.46□□□□□ -1.37
LMO3-209ENST00000447609 CCDC85AQ96PX6 553 aaPredicted RBP6.46□□□□□ -1.37
LMO3-209ENST00000447609 PLEKHF1Q96S99 279 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 TRIM35Q9UPQ4 493 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 ZBTB1Q9Y2K1 713 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 SLIT3O75094 1523 aa6.46□□□□□ -1.37
LMO3-209ENST00000447609 SHPRHQ149N8 1683 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 PITPNM1O00562 1244 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 BRD1O95696 1058 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 MX1P20591 662 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 EIF4A1P60842 406 aaKnown RBP6.46□□□□□ -1.38
LMO3-209ENST00000447609 GPS2Q13227 327 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 KIAA1524Q8TCG1 905 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 SRCIN1Q9C0H9 1055 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 BABAM1Q9NWV8 329 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 TNS2Q63HR2 1409 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 AK9Q5TCS8 1911 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 CHL1O00533 1208 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 NEMFO60524 1076 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 ANAPC15P60006 121 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 GORABQ5T7V8 394 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 NLGN1Q8N2Q7 840 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 RPGRQ92834 1020 aaKnown RBP6.46□□□□□ -1.38
LMO3-209ENST00000447609 UPF1Q92900 1129 aaKnown RBP eCLIP6.46□□□□□ -1.38
LMO3-209ENST00000447609 CWC15Q9P013 229 aaKnown RBP6.46□□□□□ -1.38
LMO3-209ENST00000447609 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.38
LMO3-209ENST00000447609 MORC2Q9Y6X9 1032 aaPredicted RBP6.46□□□□□ -1.38
LMO3-209ENST00000447609 MON2Q7Z3U7 1717 aa6.46□□□□□ -1.38
LMO3-209ENST00000447609 NRDCO43847 1150 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 HMMRO75330 724 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 CCDC192P0DO97 292 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 UBE2HP62256 183 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 DHX8Q14562 1220 aaKnown RBP6.45□□□□□ -1.38
LMO3-209ENST00000447609 USPL1Q5W0Q7 1092 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 TPTE2Q6XPS3 522 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 ILDR2Q71H61 639 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 DRC7Q8IY82 874 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 TTC12Q9H892 705 aaPredicted RBP6.45□□□□□ -1.38
LMO3-209ENST00000447609 SPON1Q9HCB6 807 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 DDX21Q9NR30 783 aaKnown RBP eCLIP6.45□□□□□ -1.38
LMO3-209ENST00000447609 AKAP12Q02952 1782 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 CCDC171Q6TFL3 1326 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 PI4KAP2A4QPH2 592 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
LMO3-209ENST00000447609 FLIIQ13045 1269 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 NKX1-1Q15270 411 aaPredicted RBP6.45□□□□□ -1.38
LMO3-209ENST00000447609 GOLGA6L1Q8N7Z2 621 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 PI4KAP1Q8N8J0 262 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.45□□□□□ -1.38
LMO3-209ENST00000447609 KDRP35968 1356 aa6.45□□□□□ -1.38
LMO3-209ENST00000447609 RPS6KA4O75676 772 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 UBTFL1P0CB47 393 aaPredicted RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 SLC15A2Q16348 729 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 PTF1AQ7RTS3 328 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 CCDC24Q8N4L8 307 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 TSPYL6Q8N831 410 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 TMEM87AQ8NBN3 555 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 SPDYE1Q8NFV5 336 aaPredicted RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 MAP3K2Q9Y2U5 619 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 HEG1Q9ULI3 1381 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 TOPAZ1Q8N9V7 1692 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 F6X3S4 739 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 EPB41L2O43491 1005 aaKnown RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 ONECUT3O60422 494 aaPredicted RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 CLCN6P51797 869 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 NEK4P51957 841 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 TPM4P67936 248 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 GPR162Q16538 588 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.44□□□□□ -1.38
LMO3-209ENST00000447609 DNAAF4Q8WXU2 420 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 FBXW7Q969H0 707 aa6.44□□□□□ -1.38
LMO3-209ENST00000447609 SGIP1Q9BQI5 828 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms