RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-215ENST00000447463 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
HDAC7-215ENST00000447463 TAF1P21675 1872 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 CTCFP49711 727 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-215ENST00000447463 CXCL9Q07325 125 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 ANKRD13DQ6ZTN6 518 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 CFAP44Q96MT7 982 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
HDAC7-215ENST00000447463 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
HDAC7-215ENST00000447463 TRPM7Q96QT4 1865 aa17.18■□□□□ 0.34
HDAC7-215ENST00000447463 PRDM10Q9NQV6 1147 aa17.17■□□□□ 0.34
HDAC7-215ENST00000447463 HYPKQ9NX55 129 aa17.17■□□□□ 0.34
HDAC7-215ENST00000447463 WBP1LQ9NX94 342 aa17.17■□□□□ 0.34
HDAC7-215ENST00000447463 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
HDAC7-215ENST00000447463 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 CIAPIN1Q6FI81 312 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 ISCA1Q9BUE6 129 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
HDAC7-215ENST00000447463 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-215ENST00000447463 MAP2K1Q02750 393 aaPredicted RBP17.15■□□□□ 0.34
HDAC7-215ENST00000447463 FMR1Q06787 632 aaKnown RBP eCLIP17.15■□□□□ 0.34
HDAC7-215ENST00000447463 TNIP1Q15025 636 aa17.15■□□□□ 0.34
HDAC7-215ENST00000447463 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
HDAC7-215ENST00000447463 DUOX1Q9NRD9 1551 aa17.15■□□□□ 0.34
HDAC7-215ENST00000447463 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
HDAC7-215ENST00000447463 TRAF5O00463 557 aa17.14■□□□□ 0.33
HDAC7-215ENST00000447463 RAD17O75943 681 aa17.14■□□□□ 0.33
HDAC7-215ENST00000447463 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
HDAC7-215ENST00000447463 MBIPQ9NS73 344 aa17.14■□□□□ 0.33
HDAC7-215ENST00000447463 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
HDAC7-215ENST00000447463 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
HDAC7-215ENST00000447463 CST9Q5W186 159 aa17.13■□□□□ 0.33
HDAC7-215ENST00000447463 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
HDAC7-215ENST00000447463 ZNF853P0CG23 659 aa17.12■□□□□ 0.33
HDAC7-215ENST00000447463 ECE1P42892 770 aa17.12■□□□□ 0.33
HDAC7-215ENST00000447463 PAXIP1Q6ZW49 1069 aaPredicted RBP17.12■□□□□ 0.33
HDAC7-215ENST00000447463 CELF1Q92879 486 aaKnown RBP17.12■□□□□ 0.33
HDAC7-215ENST00000447463 CAPNS2Q96L46 248 aa17.12■□□□□ 0.33
HDAC7-215ENST00000447463 THSD7BQ9C0I4 1608 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 YDJCA8MPS7 323 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 LBX1P52954 281 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
HDAC7-215ENST00000447463 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-215ENST00000447463 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
HDAC7-215ENST00000447463 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
HDAC7-215ENST00000447463 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
HDAC7-215ENST00000447463 IRS4O14654 1257 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-215ENST00000447463 APAF1O14727 1248 aa17.1■□□□□ 0.33
HDAC7-215ENST00000447463 GNAI1P63096 354 aa17.1■□□□□ 0.33
HDAC7-215ENST00000447463 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
HDAC7-215ENST00000447463 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
HDAC7-215ENST00000447463 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-215ENST00000447463 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
HDAC7-215ENST00000447463 H7C1D1 291 aa17.09■□□□□ 0.33
HDAC7-215ENST00000447463 CELF2O95319 508 aaKnown RBP17.09■□□□□ 0.33
HDAC7-215ENST00000447463 HSPA8P11142 646 aaKnown RBP17.09■□□□□ 0.33
HDAC7-215ENST00000447463 HIRAP54198 1017 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-215ENST00000447463 GRM1Q13255 1194 aa17.09■□□□□ 0.33
HDAC7-215ENST00000447463 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
HDAC7-215ENST00000447463 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
HDAC7-215ENST00000447463 GLIS2Q9BZE0 524 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-215ENST00000447463 COL4A1P02462 1669 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 C6orf229H3BNL8 230 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
HDAC7-215ENST00000447463 RPS8P62241 208 aaKnown RBP17.08■□□□□ 0.32
HDAC7-215ENST00000447463 GPSM2P81274 684 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 SAPCD2Q86UD0 394 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
HDAC7-215ENST00000447463 DPF2Q92785 391 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 BEGAINQ9BUH8 593 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
HDAC7-215ENST00000447463 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 POLLQ9UGP5 575 aa17.08■□□□□ 0.32
HDAC7-215ENST00000447463 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
HDAC7-215ENST00000447463 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-215ENST00000447463 PSMD14O00487 310 aa17.07■□□□□ 0.32
HDAC7-215ENST00000447463 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
HDAC7-215ENST00000447463 EYA3Q99504 573 aa17.07■□□□□ 0.32
HDAC7-215ENST00000447463 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
HDAC7-215ENST00000447463 MAP2K2P36507 400 aa17.06■□□□□ 0.32
HDAC7-215ENST00000447463 CDC37L1Q7L3B6 337 aa17.06■□□□□ 0.32
HDAC7-215ENST00000447463 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
HDAC7-215ENST00000447463 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
HDAC7-215ENST00000447463 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
HDAC7-215ENST00000447463 ECE2O60344 883 aa17.05■□□□□ 0.32
HDAC7-215ENST00000447463 RPS12P25398 132 aaKnown RBP17.05■□□□□ 0.32
HDAC7-215ENST00000447463 TBC1D16Q8TBP0 767 aa17.05■□□□□ 0.32
HDAC7-215ENST00000447463 MYD88Q99836 296 aa17.05■□□□□ 0.32
HDAC7-215ENST00000447463 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
HDAC7-215ENST00000447463 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
HDAC7-215ENST00000447463 PCCAP05165 728 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-215ENST00000447463 DOK7Q18PE1 504 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms