RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
SSR4-205ENST00000447375 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
SSR4-205ENST00000447375 SNRPA1P09661 255 aaKnown RBP16.31■□□□□ 0.2
SSR4-205ENST00000447375 ZNF157P51786 506 aaPredicted RBP16.31■□□□□ 0.2
SSR4-205ENST00000447375 RIPK4P57078 832 aa16.31■□□□□ 0.2
SSR4-205ENST00000447375 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
SSR4-205ENST00000447375 HABP4Q5JVS0 413 aaKnown RBP16.31■□□□□ 0.2
SSR4-205ENST00000447375 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
SSR4-205ENST00000447375 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
SSR4-205ENST00000447375 LAMB4A4D0S4 1761 aa16.31■□□□□ 0.2
SSR4-205ENST00000447375 CDHR2Q9BYE9 1310 aa16.3■□□□□ 0.2
SSR4-205ENST00000447375 C2orf69Q8N8R5 385 aa16.3■□□□□ 0.2
SSR4-205ENST00000447375 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
SSR4-205ENST00000447375 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
SSR4-205ENST00000447375 MRS2Q9HD23 443 aa16.3■□□□□ 0.2
SSR4-205ENST00000447375 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
SSR4-205ENST00000447375 H7C1D1 291 aa16.29■□□□□ 0.2
SSR4-205ENST00000447375 TNIP1Q15025 636 aa16.29■□□□□ 0.2
SSR4-205ENST00000447375 PKN2Q16513 984 aaKnown RBP16.29■□□□□ 0.2
SSR4-205ENST00000447375 SUPT20HQ8NEM7 779 aa16.29■□□□□ 0.2
SSR4-205ENST00000447375 RAD17O75943 681 aa16.28■□□□□ 0.2
SSR4-205ENST00000447375 LMOD3Q0VAK6 560 aa16.28■□□□□ 0.2
SSR4-205ENST00000447375 THUMPD2Q9BTF0 503 aaKnown RBP16.28■□□□□ 0.2
SSR4-205ENST00000447375 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
SSR4-205ENST00000447375 ATP6V0A2Q9Y487 856 aa16.28■□□□□ 0.2
SSR4-205ENST00000447375 KDM3BQ7LBC6 1761 aa16.28■□□□□ 0.2
SSR4-205ENST00000447375 NUP98P52948 1817 aa16.27■□□□□ 0.2
SSR4-205ENST00000447375 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
SSR4-205ENST00000447375 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
SSR4-205ENST00000447375 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 HDAC9Q9UKV0 1011 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 RIC1Q4ADV7 1423 aa16.26■□□□□ 0.19
SSR4-205ENST00000447375 APAF1O14727 1248 aa16.25■□□□□ 0.19
SSR4-205ENST00000447375 SLC10A3P09131 477 aa16.25■□□□□ 0.19
SSR4-205ENST00000447375 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
SSR4-205ENST00000447375 REM2Q8IYK8 340 aaPredicted RBP16.25■□□□□ 0.19
SSR4-205ENST00000447375 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
SSR4-205ENST00000447375 ERVV-1B6SEH8 477 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 KIAA2012Q0VF49 1180 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
SSR4-205ENST00000447375 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 DCPSQ96C86 337 aaKnown RBP16.24■□□□□ 0.19
SSR4-205ENST00000447375 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
SSR4-205ENST00000447375 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
SSR4-205ENST00000447375 GPTP24298 496 aa16.23■□□□□ 0.19
SSR4-205ENST00000447375 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
SSR4-205ENST00000447375 YDJCA8MPS7 323 aa16.22■□□□□ 0.19
SSR4-205ENST00000447375 MPNDQ8N594 471 aa16.22■□□□□ 0.19
SSR4-205ENST00000447375 DPF2Q92785 391 aa16.22■□□□□ 0.19
SSR4-205ENST00000447375 NLRP3Q96P20 1036 aa16.22■□□□□ 0.19
SSR4-205ENST00000447375 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
SSR4-205ENST00000447375 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
SSR4-205ENST00000447375 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
SSR4-205ENST00000447375 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
SSR4-205ENST00000447375 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
SSR4-205ENST00000447375 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
SSR4-205ENST00000447375 SP8Q8IXZ3 490 aa16.21■□□□□ 0.19
SSR4-205ENST00000447375 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
SSR4-205ENST00000447375 CHL1O00533 1208 aa16.2■□□□□ 0.18
SSR4-205ENST00000447375 EIF4A1P60842 406 aaKnown RBP16.2■□□□□ 0.18
SSR4-205ENST00000447375 RBM26Q5T8P6 1007 aaKnown RBP16.2■□□□□ 0.18
SSR4-205ENST00000447375 FBXO46Q6PJ61 603 aaPredicted RBP16.2■□□□□ 0.18
SSR4-205ENST00000447375 ABCC4O15439 1325 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 BBOX1O75936 387 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 NTSR2O95665 410 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 EGFRP00533 1210 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSR4-205ENST00000447375 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
SSR4-205ENST00000447375 TTLL7Q6ZT98 887 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
SSR4-205ENST00000447375 PSMD14O00487 310 aa16.18■□□□□ 0.18
SSR4-205ENST00000447375 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
SSR4-205ENST00000447375 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
SSR4-205ENST00000447375 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
SSR4-205ENST00000447375 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
SSR4-205ENST00000447375 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
SSR4-205ENST00000447375 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
SSR4-205ENST00000447375 CCER2I3L3R5 266 aa16.16■□□□□ 0.18
SSR4-205ENST00000447375 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
SSR4-205ENST00000447375 GPR25O00155 361 aa16.15■□□□□ 0.18
SSR4-205ENST00000447375 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
SSR4-205ENST00000447375 DIEXFQ68CQ4 756 aaKnown RBP16.15■□□□□ 0.18
SSR4-205ENST00000447375 CDCA5Q96FF9 252 aa16.15■□□□□ 0.18
SSR4-205ENST00000447375 MYL6BP14649 208 aa16.14■□□□□ 0.17
SSR4-205ENST00000447375 RPS12P25398 132 aaKnown RBP16.14■□□□□ 0.17
SSR4-205ENST00000447375 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
SSR4-205ENST00000447375 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
SSR4-205ENST00000447375 LAS1LQ9Y4W2 734 aaKnown RBP16.14■□□□□ 0.17
SSR4-205ENST00000447375 LAMB2P55268 1798 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 FKBP1BP68106 108 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
SSR4-205ENST00000447375 NOM1Q5C9Z4 860 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms