RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 PKD2L1Q9P0L9 805 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 PRAG1Q86YV5 1406 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
RIF1-205ENST00000444746 ZSCAN22P10073 491 aaPredicted RBP9.26□□□□□ -0.93
RIF1-205ENST00000444746 PTPN14Q15678 1187 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 KSR2Q6VAB6 950 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 BTG4Q9NY30 223 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 hCG_1642624A0A1W2PR95 340 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 CASQ1P31415 396 aa9.26□□□□□ -0.93
RIF1-205ENST00000444746 IRS4O14654 1257 aaPredicted RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 WWC2Q6AWC2 1192 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 CACNA2D4Q7Z3S7 1137 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 NCOA5Q9HCD5 579 aaKnown RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 SH2B1Q9NRF2 756 aaPredicted RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 ANKRD18AQ8IVF6 992 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 DHX58Q96C10 678 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 GOPCQ9HD26 462 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 DACT1Q9NYF0 836 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PRC1O43663 620 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PDCL2Q8N4E4 241 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 FAM227BQ96M60 508 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 TTC12Q9H892 705 aaPredicted RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 CEP131Q9UPN4 1083 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PTGS1P23219 599 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 SFPQP23246 707 aaKnown RBP eCLIP9.25□□□□□ -0.93
RIF1-205ENST00000444746 MTIF2P46199 727 aaKnown RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 MAP7D2Q96T17 732 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PRDM1O75626 825 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 SP4Q02446 784 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 AOPEPQ8N6M6 819 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PAG1Q9NWQ8 432 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 TFCP2L1Q9NZI6 479 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 MYO1BO43795 1136 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 HDAC1Q13547 482 aaPredicted RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
RIF1-205ENST00000444746 FEZ1Q99689 392 aa9.25□□□□□ -0.93
RIF1-205ENST00000444746 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 XRCC6P12956 609 aaKnown RBP eCLIP9.24□□□□□ -0.938e-6■■□□□ 12.6
RIF1-205ENST00000444746 WTAPQ15007 396 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 RGS22Q8NE09 1264 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 NSFL1CQ9UNZ2 370 aaKnown RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 IGSF3O75054 1194 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 TSPY3P0CV98 308 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 TSPY8P0CW00 308 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 FAM182BQ5T319 152 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 SCAND2PQ9GZW5 306 aaPredicted RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 VEZTQ9HBM0 779 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 PER1O15534 1290 aaPredicted RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 ZNF165P49910 485 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 KRI1Q8N9T8 703 aaKnown RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 ZBTB40Q9NUA8 1239 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 TRIM35Q9UPQ4 493 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 PLCH2O75038 1416 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 USP19O94966 1318 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 KCNQ4P56696 695 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 C17orf53Q8N3J3 647 aaPredicted RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 SETDB2Q96T68 719 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 DBNDD2Q9BQY9 259 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 ARMT1Q9H993 441 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
RIF1-205ENST00000444746 DDB1Q16531 1140 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 MCMDC2Q4G0Z9 681 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 CREB3L3Q68CJ9 461 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 CCDC186Q7Z3E2 898 aa9.24□□□□□ -0.93
RIF1-205ENST00000444746 ARID5AQ03989 594 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 PRPF4BQ13523 1007 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 CDC5LQ99459 802 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 NBPF7P0C2Y1 421 aaPredicted RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 CCDC152Q4G0S7 254 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 IFIT1BQ5T764 474 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 UBXN4Q92575 508 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 PARD3Q8TEW0 1356 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 CTDSPL2Q05D32 466 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 CCDC40Q4G0X9 1142 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 SUCLG2Q96I99 432 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 TAF4BQ92750 862 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 UTP14AQ9BVJ6 771 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 PUF60Q9UHX1 559 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 ZBTB43O43298 467 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 CCP110O43303 1012 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 PRKG1Q13976 671 aa9.23□□□□□ -0.93
RIF1-205ENST00000444746 ZYXQ15942 572 aaKnown RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 NAA16Q6N069 864 aaPredicted RBP9.23□□□□□ -0.93
RIF1-205ENST00000444746 LEKR1Q6ZMV7 388 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 CMTR1Q8N1G2 835 aaKnown RBP9.22□□□□□ -0.93
RIF1-205ENST00000444746 CHMLP26374 656 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 ASXL1Q8IXJ9 1541 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 TMCO5BA8MYB1 307 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 B4E1Z4 1266 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 MCM7P33993 719 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 IL13P35225 146 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 SPA17Q15506 151 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms