RNA–Protein interactions for RNA: ENST00000444396.5

NR1H3-212, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-212ENST00000444396 PDE3AQ14432 1141 aa23.66■■□□□ 1.38
NR1H3-212ENST00000444396 PRPF40BQ6NWY9 871 aaKnown RBP23.66■■□□□ 1.38
NR1H3-212ENST00000444396 DDX46Q7L014 1031 aaKnown RBP23.66■■□□□ 1.38
NR1H3-212ENST00000444396 TMC4Q7Z404 712 aa23.66■■□□□ 1.38
NR1H3-212ENST00000444396 JARID2Q92833 1246 aaPredicted RBP23.66■■□□□ 1.38
NR1H3-212ENST00000444396 TNNQ9UQP3 1299 aa23.66■■□□□ 1.38
NR1H3-212ENST00000444396 YBX3P16989 372 aaKnown RBP eCLIP23.65■■□□□ 1.38
NR1H3-212ENST00000444396 GRAPQ13588 217 aa23.65■■□□□ 1.38
NR1H3-212ENST00000444396 SOGA3Q5TF21 947 aa23.65■■□□□ 1.38
NR1H3-212ENST00000444396 TMEM57Q8N5G2 664 aa23.65■■□□□ 1.38
NR1H3-212ENST00000444396 GRAPLQ8TC17 118 aaPredicted RBP23.65■■□□□ 1.38
NR1H3-212ENST00000444396 CLUAP1Q96AJ1 413 aa23.65■■□□□ 1.38
NR1H3-212ENST00000444396 BCS1LQ9Y276 419 aa23.65■■□□□ 1.38
NR1H3-212ENST00000444396 BBOX1O75936 387 aa23.64■■□□□ 1.37
NR1H3-212ENST00000444396 GNAI3P08754 354 aa23.64■■□□□ 1.37
NR1H3-212ENST00000444396 FOXO4P98177 505 aa23.64■■□□□ 1.37
NR1H3-212ENST00000444396 GPR162Q16538 588 aa23.64■■□□□ 1.37
NR1H3-212ENST00000444396 RABL6Q3YEC7 729 aaPredicted RBP23.64■■□□□ 1.37
NR1H3-212ENST00000444396 C7orf43Q8WVR3 580 aa23.64■■□□□ 1.37
NR1H3-212ENST00000444396 RLBP1P12271 317 aa23.63■■□□□ 1.37
NR1H3-212ENST00000444396 GRIPAP1Q4V328 841 aa23.63■■□□□ 1.37
NR1H3-212ENST00000444396 CC2D2BQ6DHV5 1058 aa23.63■■□□□ 1.37
NR1H3-212ENST00000444396 KAZALD1Q96I82 304 aa23.63■■□□□ 1.37
NR1H3-212ENST00000444396 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
NR1H3-212ENST00000444396 UBTFL1P0CB47 393 aaPredicted RBP23.62■■□□□ 1.37
NR1H3-212ENST00000444396 SUCLG2Q96I99 432 aa23.62■■□□□ 1.37
NR1H3-212ENST00000444396 CDC5LQ99459 802 aaKnown RBP23.6■■□□□ 1.37
NR1H3-212ENST00000444396 MEIS3Q99687 375 aa23.6■■□□□ 1.37
NR1H3-212ENST00000444396 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
NR1H3-212ENST00000444396 RRP1P56182 461 aaKnown RBP23.59■■□□□ 1.37
NR1H3-212ENST00000444396 EPHA10Q5JZY3 1008 aa23.59■■□□□ 1.37
NR1H3-212ENST00000444396 GREM2Q9H772 168 aa23.59■■□□□ 1.37
NR1H3-212ENST00000444396 CACNA1SQ13698 1873 aa23.59■■□□□ 1.37
NR1H3-212ENST00000444396 LRRC37AA6NMS7 1700 aa23.59■■□□□ 1.37
NR1H3-212ENST00000444396 PPEF1O14829 653 aaPredicted RBP23.58■■□□□ 1.37
NR1H3-212ENST00000444396 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.37
NR1H3-212ENST00000444396 MVPQ14764 893 aaKnown RBP23.58■■□□□ 1.37
NR1H3-212ENST00000444396 LMBR1LQ6UX01 489 aa23.58■■□□□ 1.37
NR1H3-212ENST00000444396 SP8Q8IXZ3 490 aa23.58■■□□□ 1.37
NR1H3-212ENST00000444396 CHMP4BQ9H444 224 aaKnown RBP23.58■■□□□ 1.37
NR1H3-212ENST00000444396 BICC1Q9H694 974 aaKnown RBP23.58■■□□□ 1.37
NR1H3-212ENST00000444396 ATP6V0A2Q9Y487 856 aa23.58■■□□□ 1.37
NR1H3-212ENST00000444396 LTBP3Q9NS15 1303 aa23.58■■□□□ 1.36
NR1H3-212ENST00000444396 ZBTB7BO15156 539 aaPredicted RBP23.57■■□□□ 1.36
NR1H3-212ENST00000444396 PLIN1O60240 522 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 FAM161AQ3B820 660 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 CCDC93Q567U6 631 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 ITPRIPQ8IWB1 547 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 PELP1Q8IZL8 1130 aaKnown RBP23.57■■□□□ 1.36
NR1H3-212ENST00000444396 ANKRD44Q8N8A2 993 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 PANK1Q8TE04 598 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 CELF1Q92879 486 aaKnown RBP23.57■■□□□ 1.36
NR1H3-212ENST00000444396 SEC31BQ9NQW1 1179 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 DDX19BQ9UMR2 479 aa23.57■■□□□ 1.36
NR1H3-212ENST00000444396 C21orf2O43822 256 aa23.56■■□□□ 1.36
NR1H3-212ENST00000444396 ITGA6P23229 1130 aa23.56■■□□□ 1.36
NR1H3-212ENST00000444396 RTKN2Q8IZC4 609 aa23.56■■□□□ 1.36
NR1H3-212ENST00000444396 WWC3Q9ULE0 1092 aa23.56■■□□□ 1.36
NR1H3-212ENST00000444396 FER1L6Q2WGJ9 1857 aa23.56■■□□□ 1.36
NR1H3-212ENST00000444396 ANKRD18BA2A2Z9 1011 aa23.55■■□□□ 1.36
NR1H3-212ENST00000444396 IFIT5Q13325 482 aaKnown RBP23.55■■□□□ 1.36
NR1H3-212ENST00000444396 MTX1Q13505 466 aa23.55■■□□□ 1.36
NR1H3-212ENST00000444396 ANKRD18AQ8IVF6 992 aa23.55■■□□□ 1.36
NR1H3-212ENST00000444396 COL4A1P02462 1669 aa23.54■■□□□ 1.36
NR1H3-212ENST00000444396 GNAI2P04899 355 aa23.54■■□□□ 1.36
NR1H3-212ENST00000444396 CCDC57Q2TAC2 916 aa23.54■■□□□ 1.36
NR1H3-212ENST00000444396 TMX4Q9H1E5 349 aaPredicted RBP23.54■■□□□ 1.36
NR1H3-212ENST00000444396 BSDC1Q9NW68 430 aaPredicted RBP23.54■■□□□ 1.36
NR1H3-212ENST00000444396 CCDC85AQ96PX6 553 aaPredicted RBP23.53■■□□□ 1.36
NR1H3-212ENST00000444396 LRRFIP2Q9Y608 721 aaKnown RBP23.53■■□□□ 1.36
NR1H3-212ENST00000444396 TAF1P21675 1872 aa23.53■■□□□ 1.36
NR1H3-212ENST00000444396 IGHMBP2P38935 993 aaKnown RBP23.52■■□□□ 1.36
NR1H3-212ENST00000444396 PSMD1Q99460 953 aa23.52■■□□□ 1.36
NR1H3-212ENST00000444396 NFKBIEO00221 500 aa23.51■■□□□ 1.35
NR1H3-212ENST00000444396 COG6Q9Y2V7 657 aa23.51■■□□□ 1.35
NR1H3-212ENST00000444396 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
NR1H3-212ENST00000444396 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
NR1H3-212ENST00000444396 ARHGAP27Q6ZUM4 889 aa23.5■■□□□ 1.35
NR1H3-212ENST00000444396 RTFDC1Q9BY42 306 aaPredicted RBP23.5■■□□□ 1.35
NR1H3-212ENST00000444396 PODXL2Q9NZ53 605 aa23.5■■□□□ 1.35
NR1H3-212ENST00000444396 CHMP3Q9Y3E7 222 aa23.5■■□□□ 1.35
NR1H3-212ENST00000444396 FKBP4Q02790 459 aaKnown RBP eCLIP23.49■■□□□ 1.35
NR1H3-212ENST00000444396 VPS33BQ9H267 617 aa23.49■■□□□ 1.35
NR1H3-212ENST00000444396 TAOK3Q9H2K8 898 aa23.49■■□□□ 1.35
NR1H3-212ENST00000444396 FBXO3Q9UK99 471 aa23.49■■□□□ 1.35
NR1H3-212ENST00000444396 LTBP1Q14766 1721 aa23.49■■□□□ 1.35
NR1H3-212ENST00000444396 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
NR1H3-212ENST00000444396 ZBTB40Q9NUA8 1239 aa23.48■■□□□ 1.35
NR1H3-212ENST00000444396 RFX5P48382 616 aaPredicted RBP23.47■■□□□ 1.35
NR1H3-212ENST00000444396 SUPT20HQ8NEM7 779 aa23.47■■□□□ 1.35
NR1H3-212ENST00000444396 ZNF219Q9P2Y4 722 aaPredicted RBP23.47■■□□□ 1.35
NR1H3-212ENST00000444396 TAF7LQ5H9L4 462 aa23.46■■□□□ 1.35
NR1H3-212ENST00000444396 OLFM4Q6UX06 510 aa23.46■■□□□ 1.35
NR1H3-212ENST00000444396 MPNDQ8N594 471 aa23.46■■□□□ 1.35
NR1H3-212ENST00000444396 MINPP1Q9UNW1 487 aa23.46■■□□□ 1.35
NR1H3-212ENST00000444396 CHD4Q14839 1912 aa23.45■■□□□ 1.35
NR1H3-212ENST00000444396 DUOX1Q9NRD9 1551 aa23.45■■□□□ 1.34
NR1H3-212ENST00000444396 LMNB1P20700 586 aa23.45■■□□□ 1.34
NR1H3-212ENST00000444396 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
NR1H3-212ENST00000444396 XDHP47989 1333 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms