RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 GGA1Q9UJY5 639 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 TFCP2Q12800 502 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 PRPF40BQ6NWY9 871 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 ZBTB40Q9NUA8 1239 aa16.7■□□□□ 0.26
SMARCA4-204ENST00000444061 ATP2B1P20020 1258 aa16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 IQCA1Q86XH1 822 aa16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 PDRG1Q9NUG6 133 aa16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 IGHDP01880 384 aa16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 CHMP5Q9NZZ3 219 aa16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 CCDC47Q96A33 483 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-204ENST00000444061 NEURL1BA8MQ27 555 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
SMARCA4-204ENST00000444061 DEPDC5O75140 1603 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 CDKL5O76039 1030 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 CABP5Q9NP86 173 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 HEG1Q9ULI3 1381 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 NBPF7P0C2Y1 421 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 RBM26Q5T8P6 1007 aaKnown RBP16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 LARGE2Q8N3Y3 721 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 ZBTB7BO15156 539 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 LMOD1P29536 600 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
SMARCA4-204ENST00000444061 PDE1AP54750 535 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 GIGYF2Q6Y7W6 1299 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 FEZ1Q99689 392 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 PDE4BQ07343 736 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 DDX49Q9Y6V7 483 aaKnown RBP16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 SLIT1O75093 1534 aa16.66■□□□□ 0.26
SMARCA4-204ENST00000444061 CASTP20810 708 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 ZNF594Q96JF6 807 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 HIBADHP31937 336 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 C2CD5Q86YS7 1000 aa16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 GJA3Q9Y6H8 435 aa16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 LDHBP07195 334 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 GPR162Q16538 588 aa16.65■□□□□ 0.26
SMARCA4-204ENST00000444061 ZSCAN31Q96LW9 406 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 PCCAP05165 728 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 MPNDQ8N594 471 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 JAG2Q9Y219 1238 aa16.64■□□□□ 0.25
SMARCA4-204ENST00000444061 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 A0A1B0GUL7 405 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 PLCG2P16885 1265 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 EIF6P56537 245 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 HMGB1P09429 215 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 TIMM10P62072 90 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 HOOK1Q9UJC3 728 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 TTC41PQ6P2S7 1318 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 CTSWP56202 376 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 KDRP35968 1356 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 SERPINB2P05120 415 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 NF2P35240 595 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
SMARCA4-204ENST00000444061 SKAP1Q86WV1 359 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 TSPY2A6NKD2 308 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 PIBF1Q8WXW3 757 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 MST1RQ04912 1400 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 MED14O60244 1454 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 IFIT3O14879 490 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 TAF5LO75529 589 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 PICALMQ13492 652 aa16.62■□□□□ 0.25
SMARCA4-204ENST00000444061 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms