RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 NXPE4Q6UWF7 544 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 ANKS3Q6ZW76 656 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 FILIP1Q7Z7B0 1213 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 CABP1Q9NZU7 370 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 STRIP2Q9ULQ0 834 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 TLL2Q9Y6L7 1015 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 SIAH2O43255 324 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 ADH1AP07327 375 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 CENPCQ03188 943 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 NR5A1Q13285 461 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 EHBP1Q8NDI1 1231 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 TTC16Q8NEE8 873 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 SRPK1Q96SB4 655 aaKnown RBP7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 GINM1Q9NU53 330 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 PRKAB1Q9Y478 270 aa7.42□□□□□ -1.22
TM9SF3-202ENST00000443638 FAM221BA6H8Z2 402 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 TXLNAP40222 546 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 TRIP4Q15650 581 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 PLEKHG6Q3KR16 790 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 IER5Q5VY09 327 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 STAG1Q8WVM7 1258 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 EAF1Q96JC9 268 aaPredicted RBP7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 DEPDC7Q96QD5 511 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 IRF2BPLQ9H1B7 796 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 TMX1Q9H3N1 280 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 SPC25Q9HBM1 224 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 NPHS2Q9NP85 383 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 EFR3BQ9Y2G0 817 aa7.41□□□□□ -1.22
TM9SF3-202ENST00000443638 PLEKHD1A6NEE1 506 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 GFRA3O60609 400 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 GRM2Q14416 872 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 RC3H1Q5TC82 1133 aaKnown RBP7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 GALNT12Q8IXK2 581 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 ANKRD24Q8TF21 1146 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 NIFKQ9BYG3 293 aaKnown RBP7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 CHRDQ9H2X0 955 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 SUV39H2Q9H5I1 410 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 MSRB2Q9Y3D2 182 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 RIPOR2Q9Y4F9 1068 aa7.4□□□□□ -1.22
TM9SF3-202ENST00000443638 AMPD3Q01432 767 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 PWP1Q13610 501 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 COL9A2Q14055 689 aaPredicted RBP7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 HNRNPLLQ8WVV9 542 aaKnown RBP7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 KLRG1Q96E93 195 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 TMEM74Q96NL1 305 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 NT5C1AQ9BXI3 368 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 PGPEP1Q9NXJ5 209 aa7.39□□□□□ -1.23
TM9SF3-202ENST00000443638 PHACTR2O75167 634 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 GARTP22102 1010 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 GSTT1P30711 240 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 INPP5BP32019 993 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 RPIAP49247 311 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 CBLBQ13191 982 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 KIAA0907Q7Z7F0 614 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 GLIS3Q8NEA6 775 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 RHOVQ96L33 236 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 TRIM55Q9BYV6 548 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 DDX56Q9NY93 547 aaKnown RBP7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 PRKAG3Q9UGI9 489 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 MRVI1Q9Y6F6 885 aa7.38□□□□□ -1.23
TM9SF3-202ENST00000443638 LOC102724159A0A0B4J2E5 919 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 NRG2O14511 850 aaPredicted RBP7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 GREM1O60565 184 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 CDC45O75419 566 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 POLR3DP05423 398 aaPredicted RBP7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 VEGFBP49765 207 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 PWP2Q15269 919 aaKnown RBP7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 HIF1AQ16665 826 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 SUSD3Q96L08 255 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 TRIM56Q9BRZ2 755 aaKnown RBP7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 TMEM63CQ9P1W3 806 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 FAN1Q9Y2M0 1017 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 KCNMB2Q9Y691 235 aa7.37□□□□□ -1.23
TM9SF3-202ENST00000443638 RNF223E7ERA6 249 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 LCE2BO14633 110 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 PTGIRP43119 386 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 IDH3AP50213 366 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 CTC1Q2NKJ3 1217 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 KIAA0319Q5VV43 1072 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 PCNX4Q63HM2 1172 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 RELL1Q8IUW5 271 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 ANKLE1Q8NAG6 615 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 ZNF280CQ8ND82 737 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 FANCLQ9NW38 375 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms