RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 CNTROBQ8N137 903 aa22.89■■□□□ 1.26
POLR1E-203ENST00000442009 MAP4K4O95819 1239 aaPredicted RBP22.89■■□□□ 1.25
POLR1E-203ENST00000442009 PUS3Q9BZE2 481 aaKnown RBP22.89■■□□□ 1.25
POLR1E-203ENST00000442009 SCN7AQ01118 1682 aa22.88■■□□□ 1.25
POLR1E-203ENST00000442009 SH3TC1Q8TE82 1336 aa22.88■■□□□ 1.25
POLR1E-203ENST00000442009 ATP5JP18859 108 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 IFIT5Q13325 482 aaKnown RBP22.87■■□□□ 1.25
POLR1E-203ENST00000442009 UTP14AQ9BVJ6 771 aaKnown RBP22.87■■□□□ 1.25
POLR1E-203ENST00000442009 ZNF652Q9Y2D9 606 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 DDX60Q8IY21 1712 aaKnown RBP22.87■■□□□ 1.25
POLR1E-203ENST00000442009 NTSR2O95665 410 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 BECN1Q14457 450 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 FAM196AQ6ZSG2 479 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 TBC1D2Q9BYX2 928 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 GREM2Q9H772 168 aa22.87■■□□□ 1.25
POLR1E-203ENST00000442009 NIP7Q9Y221 180 aaKnown RBP eCLIP22.87■■□□□ 1.25
POLR1E-203ENST00000442009 LAMB2P55268 1798 aa22.86■■□□□ 1.25
POLR1E-203ENST00000442009 KRT27Q7Z3Y8 459 aa22.86■■□□□ 1.25
POLR1E-203ENST00000442009 EVI5LQ96CN4 794 aa22.86■■□□□ 1.25
POLR1E-203ENST00000442009 BCL2L12Q9HB09 334 aa22.86■■□□□ 1.25
POLR1E-203ENST00000442009 EP400Q96L91 3159 aa22.86■■□□□ 1.25
POLR1E-203ENST00000442009 DBNDD2Q9BQY9 259 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 NARFQ9UHQ1 456 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 C4BP0C0L5 1744 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 EPB41L2O43491 1005 aaKnown RBP22.85■■□□□ 1.25
POLR1E-203ENST00000442009 ITGA6P23229 1130 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
POLR1E-203ENST00000442009 IL25Q9H293 177 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 RIPOR2Q9Y4F9 1068 aa22.85■■□□□ 1.25
POLR1E-203ENST00000442009 CCDC85AQ96PX6 553 aaPredicted RBP22.84■■□□□ 1.25
POLR1E-203ENST00000442009 ZNF609O15014 1411 aa22.83■■□□□ 1.25
POLR1E-203ENST00000442009 RBM6P78332 1123 aaKnown RBP22.83■■□□□ 1.25
POLR1E-203ENST00000442009 SNX21Q969T3 373 aa22.83■■□□□ 1.25
POLR1E-203ENST00000442009 DAXXQ9UER7 740 aaPredicted RBP22.83■■□□□ 1.25
POLR1E-203ENST00000442009 ANKRD18BA2A2Z9 1011 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 SGSM2O43147 1006 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 SMIM5Q71RC9 77 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 AMIGO3Q86WK7 504 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 BOLA2Q9H3K6 86 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 LRRC4BQ9NT99 713 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 CEP126Q9P2H0 1117 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 LRP5O75197 1615 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 GNPATO15228 680 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 TIMM10P62072 90 aa22.82■■□□□ 1.24
POLR1E-203ENST00000442009 HCLS1P14317 486 aaPredicted RBP22.81■■□□□ 1.24
POLR1E-203ENST00000442009 RTCBQ9Y3I0 505 aaKnown RBP22.81■■□□□ 1.24
POLR1E-203ENST00000442009 RTL9Q8NET4 1388 aa22.81■■□□□ 1.24
POLR1E-203ENST00000442009 RIC1Q4ADV7 1423 aa22.8■■□□□ 1.24
POLR1E-203ENST00000442009 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
POLR1E-203ENST00000442009 A0A1B0GUL7 405 aa22.8■■□□□ 1.24
POLR1E-203ENST00000442009 HSP90B1P14625 803 aaKnown RBP22.8■■□□□ 1.24
POLR1E-203ENST00000442009 IL17RAQ96F46 866 aa22.8■■□□□ 1.24
POLR1E-203ENST00000442009 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 TAF7LQ5H9L4 462 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 USPL1Q5W0Q7 1092 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 LDHAL6AQ6ZMR3 332 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 ARHGEF1Q92888 912 aaKnown RBP22.79■■□□□ 1.24
POLR1E-203ENST00000442009 HAUS7Q99871 368 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
POLR1E-203ENST00000442009 VGLL2Q8N8G2 317 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 SNRKQ9NRH2 765 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 AKAP2Q9Y2D5 859 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 TBC1D9BQ66K14 1250 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 NEUROD6Q96NK8 337 aa22.78■■□□□ 1.24
POLR1E-203ENST00000442009 SRP68Q9UHB9 627 aaKnown RBP22.78■■□□□ 1.24
POLR1E-203ENST00000442009 SLC27A3Q5K4L6 730 aa22.77■■□□□ 1.24
POLR1E-203ENST00000442009 SLC10A5Q5PT55 438 aa22.77■■□□□ 1.24
POLR1E-203ENST00000442009 UBR3Q6ZT12 1888 aa22.77■■□□□ 1.23
POLR1E-203ENST00000442009 HIP1O00291 1037 aa22.76■■□□□ 1.23
POLR1E-203ENST00000442009 RABEP1Q15276 862 aa22.76■■□□□ 1.23
POLR1E-203ENST00000442009 CWC27Q6UX04 472 aaKnown RBP22.76■■□□□ 1.23
POLR1E-203ENST00000442009 ANO2Q9NQ90 1003 aa22.76■■□□□ 1.23
POLR1E-203ENST00000442009 TRIM37O94972 964 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.75■■□□□ 1.23
POLR1E-203ENST00000442009 RUFY2Q8WXA3 655 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 LSG1Q9H089 658 aaKnown RBP22.75■■□□□ 1.23
POLR1E-203ENST00000442009 DIAPH3Q9NSV4 1193 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 CASZ1Q86V15 1759 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 ZPR1O75312 459 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 TICAM2Q86XR7 235 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 RFX7Q2KHR2 1363 aa22.75■■□□□ 1.23
POLR1E-203ENST00000442009 ERFEQ4G0M1 354 aa22.74■■□□□ 1.23
POLR1E-203ENST00000442009 CCDC152Q4G0S7 254 aa22.74■■□□□ 1.23
POLR1E-203ENST00000442009 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
POLR1E-203ENST00000442009 CD2BP2O95400 341 aaKnown RBP22.73■■□□□ 1.23
POLR1E-203ENST00000442009 ADRA2BP18089 450 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 ANAPC15P60006 121 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 SF3B3Q15393 1217 aaKnown RBP22.73■■□□□ 1.23
POLR1E-203ENST00000442009 TRAPPC3LQ5T215 181 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 XAGE2Q96GT9 111 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 CNNM1Q9NRU3 951 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 SPEF2Q9C093 1822 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 RAD50Q92878 1312 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 PDE8BO95263 885 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 METTL24Q5JXM2 366 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 SEC31BQ9NQW1 1179 aa22.73■■□□□ 1.23
POLR1E-203ENST00000442009 HSPA4P34932 840 aa22.72■■□□□ 1.23
POLR1E-203ENST00000442009 PROM2Q8N271 834 aa22.72■■□□□ 1.23
POLR1E-203ENST00000442009 FSD1Q9BTV5 496 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms