RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 TNS4Q8IZW8 715 aa26.92■■□□□ 1.9
CPNE1-219ENST00000440240 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
CPNE1-219ENST00000440240 GNAI1P63096 354 aa26.91■■□□□ 1.9
CPNE1-219ENST00000440240 TRIM28Q13263 835 aaKnown RBP26.91■■□□□ 1.9
CPNE1-219ENST00000440240 IFT57Q9NWB7 429 aa26.91■■□□□ 1.9
CPNE1-219ENST00000440240 ADAMTSL1Q8N6G6 1762 aa26.91■■□□□ 1.9
CPNE1-219ENST00000440240 ATP5J2-PTCD1G3V325 749 aa26.9■■□□□ 1.9
CPNE1-219ENST00000440240 CXCL9Q07325 125 aa26.9■■□□□ 1.9
CPNE1-219ENST00000440240 KIAA2012Q0VF49 1180 aa26.9■■□□□ 1.9
CPNE1-219ENST00000440240 FAM89AQ96GI7 184 aa26.9■■□□□ 1.9
CPNE1-219ENST00000440240 VEGFBP49765 207 aa26.89■■□□□ 1.9
CPNE1-219ENST00000440240 SF3B3Q15393 1217 aaKnown RBP26.89■■□□□ 1.9
CPNE1-219ENST00000440240 CHMP4AQ9BY43 222 aa26.88■■□□□ 1.89
CPNE1-219ENST00000440240 GPRC5DQ9NZD1 345 aa26.88■■□□□ 1.89
CPNE1-219ENST00000440240 TNIP1Q15025 636 aa26.87■■□□□ 1.89
CPNE1-219ENST00000440240 DEFB115Q30KQ5 88 aa26.87■■□□□ 1.89
CPNE1-219ENST00000440240 RIC3Q7Z5B4 369 aa26.87■■□□□ 1.89
CPNE1-219ENST00000440240 ZNF428Q96B54 188 aa26.87■■□□□ 1.89
CPNE1-219ENST00000440240 ADARB2Q9NS39 739 aaKnown RBP26.87■■□□□ 1.89
CPNE1-219ENST00000440240 RASSF10A6NK89 507 aa26.86■■□□□ 1.89
CPNE1-219ENST00000440240 GOLGA2Q08379 1002 aa26.86■■□□□ 1.89
CPNE1-219ENST00000440240 CIAPIN1Q6FI81 312 aa26.86■■□□□ 1.89
CPNE1-219ENST00000440240 HSP90B1P14625 803 aaKnown RBP26.85■■□□□ 1.89
CPNE1-219ENST00000440240 ELL2O00472 640 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-219ENST00000440240 ABT1Q9ULW3 272 aaKnown RBP26.84■■□□□ 1.89
CPNE1-219ENST00000440240 LAMB2P55268 1798 aa26.84■■□□□ 1.89
CPNE1-219ENST00000440240 LTBP1Q14766 1721 aa26.83■■□□□ 1.89
CPNE1-219ENST00000440240 IRS4O14654 1257 aaPredicted RBP26.83■■□□□ 1.89
CPNE1-219ENST00000440240 GMPSP49915 693 aaPredicted RBP26.83■■□□□ 1.89
CPNE1-219ENST00000440240 AIDAQ96BJ3 306 aa26.83■■□□□ 1.89
CPNE1-219ENST00000440240 NSFL1CQ9UNZ2 370 aaKnown RBP26.83■■□□□ 1.89
CPNE1-219ENST00000440240 CDHR2Q9BYE9 1310 aa26.83■■□□□ 1.89
CPNE1-219ENST00000440240 RTL5Q5HYW3 569 aaPredicted RBP26.82■■□□□ 1.88
CPNE1-219ENST00000440240 CELF1Q92879 486 aaKnown RBP26.82■■□□□ 1.88
CPNE1-219ENST00000440240 BCL2L13Q9BXK5 485 aa26.82■■□□□ 1.88
CPNE1-219ENST00000440240 PHAXQ9H814 394 aaKnown RBP26.82■■□□□ 1.88
CPNE1-219ENST00000440240 RAD17O75943 681 aa26.81■■□□□ 1.88
CPNE1-219ENST00000440240 WASHC4Q2M389 1173 aa26.81■■□□□ 1.88
CPNE1-219ENST00000440240 ZBTB38Q8NAP3 1195 aaPredicted RBP26.81■■□□□ 1.88
CPNE1-219ENST00000440240 FOXN1O15353 648 aa26.79■■□□□ 1.88
CPNE1-219ENST00000440240 RPS8P62241 208 aaKnown RBP26.79■■□□□ 1.88
CPNE1-219ENST00000440240 CCDC30Q5VVM6 783 aa26.79■■□□□ 1.88
CPNE1-219ENST00000440240 C8orf58Q8NAV2 365 aa26.79■■□□□ 1.88
CPNE1-219ENST00000440240 CCDC191Q8NCU4 936 aa26.79■■□□□ 1.88
CPNE1-219ENST00000440240 WBP1LQ9NX94 342 aa26.79■■□□□ 1.88
CPNE1-219ENST00000440240 DDX58O95786 925 aaKnown RBP26.78■■□□□ 1.88
CPNE1-219ENST00000440240 CTCFP49711 727 aaPredicted RBP26.78■■□□□ 1.88
CPNE1-219ENST00000440240 ZC3H15Q8WU90 426 aaKnown RBP26.78■■□□□ 1.88
CPNE1-219ENST00000440240 MYD88Q99836 296 aa26.78■■□□□ 1.88
CPNE1-219ENST00000440240 PGAP2Q9UHJ9 254 aa26.78■■□□□ 1.88
CPNE1-219ENST00000440240 WDR33Q9C0J8 1336 aaKnown RBP26.78■■□□□ 1.88
CPNE1-219ENST00000440240 YDJCA8MPS7 323 aa26.77■■□□□ 1.88
CPNE1-219ENST00000440240 C6orf229H3BNL8 230 aa26.77■■□□□ 1.88
CPNE1-219ENST00000440240 FMR1Q06787 632 aaKnown RBP eCLIP26.77■■□□□ 1.887e-7■■■□□ 18.6
CPNE1-219ENST00000440240 PRDM10Q9NQV6 1147 aa26.77■■□□□ 1.88
CPNE1-219ENST00000440240 CNOT7Q9UIV1 285 aaKnown RBP26.77■■□□□ 1.88
CPNE1-219ENST00000440240 H7C1D1 291 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 TRAF5O00463 557 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 MAP2K1Q02750 393 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-219ENST00000440240 CST9Q5W186 159 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 EYA3Q99504 573 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 POLLQ9UGP5 575 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 TAF1P21675 1872 aa26.76■■□□□ 1.87
CPNE1-219ENST00000440240 DDX60Q8IY21 1712 aaKnown RBP26.76■■□□□ 1.87
CPNE1-219ENST00000440240 CAPN15O75808 1086 aa26.75■■□□□ 1.87
CPNE1-219ENST00000440240 PCCAP05165 728 aaPredicted RBP26.75■■□□□ 1.87
CPNE1-219ENST00000440240 ECE1P42892 770 aa26.75■■□□□ 1.87
CPNE1-219ENST00000440240 GPSM2P81274 684 aa26.75■■□□□ 1.87
CPNE1-219ENST00000440240 DPF2Q92785 391 aa26.75■■□□□ 1.87
CPNE1-219ENST00000440240 CWC25Q9NXE8 425 aaPredicted RBP26.75■■□□□ 1.87
CPNE1-219ENST00000440240 RIMBP2O15034 1052 aa26.74■■□□□ 1.87
CPNE1-219ENST00000440240 METTL22Q9BUU2 404 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-219ENST00000440240 CCDC152Q4G0S7 254 aa26.73■■□□□ 1.87
CPNE1-219ENST00000440240 DUOX1Q9NRD9 1551 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 PDE8AO60658 829 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 HIRAP54198 1017 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-219ENST00000440240 PAXIP1Q6ZW49 1069 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-219ENST00000440240 CDC37L1Q7L3B6 337 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 TBC1D16Q8TBP0 767 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 CAPNS2Q96L46 248 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 DBNDD1Q9H9R9 158 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 PODXL2Q9NZ53 605 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 TLL2Q9Y6L7 1015 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 LRRC37AA6NMS7 1700 aa26.72■■□□□ 1.87
CPNE1-219ENST00000440240 CCDC27Q2M243 656 aa26.71■■□□□ 1.87
CPNE1-219ENST00000440240 MICALL2Q8IY33 904 aa26.71■■□□□ 1.87
CPNE1-219ENST00000440240 ZC3H12CQ9C0D7 883 aaKnown RBP26.71■■□□□ 1.87
CPNE1-219ENST00000440240 SEC31BQ9NQW1 1179 aa26.71■■□□□ 1.87
CPNE1-219ENST00000440240 PSMD14O00487 310 aa26.7■■□□□ 1.86
CPNE1-219ENST00000440240 TSPYL6Q8N831 410 aa26.7■■□□□ 1.86
CPNE1-219ENST00000440240 GLIS2Q9BZE0 524 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-219ENST00000440240 ZBTB12Q9Y330 459 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-219ENST00000440240 ECE2O60344 883 aa26.69■■□□□ 1.86
CPNE1-219ENST00000440240 CELF2O95319 508 aaKnown RBP26.69■■□□□ 1.86
CPNE1-219ENST00000440240 RPS12P25398 132 aaKnown RBP26.69■■□□□ 1.86
CPNE1-219ENST00000440240 KSR2Q6VAB6 950 aa26.69■■□□□ 1.86
CPNE1-219ENST00000440240 TRPM4Q8TD43 1214 aa26.69■■□□□ 1.86
CPNE1-219ENST00000440240 GPR101Q96P66 508 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-219ENST00000440240 STK31Q9BXU1 1019 aa26.69■■□□□ 1.86
CPNE1-219ENST00000440240 ANKIB1Q9P2G1 1089 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms