RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 ZSCAN16Q9H4T2 348 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-202ENST00000439984 SERPINA10Q9UK55 444 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 GSTTP1A0A1W2PQM5 241 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 CCDC160A6NGH7 325 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 PDE1AP54750 535 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 FBF1Q8TES7 1133 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
PCNX1-202ENST00000439984 KDM6BO15054 1643 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCNX1-202ENST00000439984 DUOX2Q9NRD8 1548 aa16.79■□□□□ 0.28
PCNX1-202ENST00000439984 PRPF4BQ13523 1007 aaKnown RBP16.78■□□□□ 0.28
PCNX1-202ENST00000439984 ZBTB22O15209 634 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 MYO1BO43795 1136 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 MYL6BP14649 208 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 CPLX4Q7Z7G2 160 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 PYCARDQ9ULZ3 195 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
PCNX1-202ENST00000439984 MARCKSP29966 332 aaPredicted RBP16.78■□□□□ 0.28
PCNX1-202ENST00000439984 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.28
PCNX1-202ENST00000439984 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
PCNX1-202ENST00000439984 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.77■□□□□ 0.28
PCNX1-202ENST00000439984 NLRP6P59044 892 aa16.77■□□□□ 0.28
PCNX1-202ENST00000439984 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
PCNX1-202ENST00000439984 WASF1Q92558 559 aa16.77■□□□□ 0.28
PCNX1-202ENST00000439984 RTEL1-TNFRSF6BF6WH68 1400 aa16.77■□□□□ 0.28
PCNX1-202ENST00000439984 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.27
PCNX1-202ENST00000439984 RTL1A6NKG5 1358 aa16.77■□□□□ 0.27
PCNX1-202ENST00000439984 KIF5BP33176 963 aa16.77■□□□□ 0.27
PCNX1-202ENST00000439984 SELENOSQ9BQE4 189 aa16.77■□□□□ 0.27
PCNX1-202ENST00000439984 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-202ENST00000439984 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 IFT81Q8WYA0 676 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
PCNX1-202ENST00000439984 FRMD3A2A2Y4 597 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 PKP1Q13835 747 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 ANKS4BQ8N8V4 417 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 PER1O15534 1290 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-202ENST00000439984 BUB1BO60566 1050 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-202ENST00000439984 LIG3P49916 1009 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 SHANK2Q9UPX8 1470 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 ANAPC15P60006 121 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 E2F4Q16254 413 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 BRF1Q92994 677 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 CEP83Q9Y592 693 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 CPA1P15085 419 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
PCNX1-202ENST00000439984 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
PCNX1-202ENST00000439984 KDM5BQ9UGL1 1544 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 NOP2P46087 812 aaKnown RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 C14orf93Q9H972 538 aaKnown RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 CCDC57Q2TAC2 916 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 MEIS3Q99687 375 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 HPDP32754 393 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 GOLGA6DP0CG33 693 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 GCKP35557 465 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 AFMP43652 599 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 CEP63Q96MT8 703 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 BAG1Q99933 345 aaPredicted RBP16.75■□□□□ 0.27
PCNX1-202ENST00000439984 GOLGA6AQ9NYA3 693 aa16.75■□□□□ 0.27
PCNX1-202ENST00000439984 SMIM23A6NLE4 172 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 PSME1Q06323 249 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 INTS4Q96HW7 963 aaKnown RBP16.74■□□□□ 0.27
PCNX1-202ENST00000439984 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 PAIP2Q9BPZ3 127 aaKnown RBP16.74■□□□□ 0.27
PCNX1-202ENST00000439984 NUP160Q12769 1436 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 MPHOSPH10O00566 681 aaKnown RBP16.74■□□□□ 0.27
PCNX1-202ENST00000439984 SF3A3Q12874 501 aaKnown RBP eCLIP16.74■□□□□ 0.27
PCNX1-202ENST00000439984 PEX19P40855 299 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 RRP15Q9Y3B9 282 aaKnown RBP16.74■□□□□ 0.27
PCNX1-202ENST00000439984 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
PCNX1-202ENST00000439984 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCNX1-202ENST00000439984 CAPN7Q9Y6W3 813 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 GOLIM4O00461 696 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 HMGB1P09429 215 aaKnown RBP16.73■□□□□ 0.27
PCNX1-202ENST00000439984 GDAP1L1Q96MZ0 367 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 TRIM21P19474 475 aaKnown RBP16.73■□□□□ 0.27
PCNX1-202ENST00000439984 CNNM1Q9NRU3 951 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
PCNX1-202ENST00000439984 CTNNBL1Q8WYA6 563 aaPredicted RBP16.73■□□□□ 0.27
PCNX1-202ENST00000439984 NSRP1Q9H0G5 558 aaKnown RBP16.73■□□□□ 0.27
PCNX1-202ENST00000439984 AKR1B10O60218 316 aa16.72■□□□□ 0.27
PCNX1-202ENST00000439984 MKRN1Q9UHC7 482 aaKnown RBP16.72■□□□□ 0.27
PCNX1-202ENST00000439984 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms