RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 SCAND2PQ9GZW5 306 aaPredicted RBP15.78■□□□□ 0.12
LRCH3-206ENST00000438796 SH2B1Q9NRF2 756 aaPredicted RBP15.78■□□□□ 0.12
LRCH3-206ENST00000438796 GJA3Q9Y6H8 435 aa15.78■□□□□ 0.12
LRCH3-206ENST00000438796 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.12
LRCH3-206ENST00000438796 PTGS1P23219 599 aa15.77■□□□□ 0.12
LRCH3-206ENST00000438796 WTAPQ15007 396 aa15.77■□□□□ 0.12
LRCH3-206ENST00000438796 CCDC63Q8NA47 563 aa15.77■□□□□ 0.12
LRCH3-206ENST00000438796 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
LRCH3-206ENST00000438796 NCOA7Q8NI08 942 aa15.77■□□□□ 0.12
LRCH3-206ENST00000438796 HECW1Q76N89 1606 aa15.77■□□□□ 0.11
LRCH3-206ENST00000438796 RBM25P49756 843 aaKnown RBP15.77■□□□□ 0.11
LRCH3-206ENST00000438796 FLIIQ13045 1269 aa15.77■□□□□ 0.11
LRCH3-206ENST00000438796 GSTA5Q7RTV2 222 aa15.77■□□□□ 0.11
LRCH3-206ENST00000438796 NECAB1Q8N987 351 aa15.77■□□□□ 0.11
LRCH3-206ENST00000438796 FAM114A1Q8IWE2 563 aa15.77■□□□□ 0.11
LRCH3-206ENST00000438796 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 RAB3IL1Q8TBN0 382 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
LRCH3-206ENST00000438796 SNAPC4Q5SXM2 1469 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 MXRA7P84157 204 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 NEK1Q96PY6 1258 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 MCM3P25205 808 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 SMARCC2Q8TAQ2 1214 aa15.76■□□□□ 0.11
LRCH3-206ENST00000438796 SH3BP5O60239 455 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 PLEKHH2Q8IVE3 1493 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 PSMC4P43686 418 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 KRT13P13646 458 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 STX1AQ16623 288 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 CCDC50Q8IVM0 306 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
LRCH3-206ENST00000438796 NESP48681 1621 aa15.75■□□□□ 0.11
LRCH3-206ENST00000438796 KIAA0753Q2KHM9 967 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 EHBP1L1Q8N3D4 1523 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 NAPAP54920 295 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 TFCP2L1Q9NZI6 479 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 KLF18A0A0U1RQI7 1052 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 NDC80O14777 642 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
LRCH3-206ENST00000438796 LRPPRCP42704 1394 aaKnown RBP15.74■□□□□ 0.11
LRCH3-206ENST00000438796 TCEANC2Q96MN5 208 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 CHST3Q7LGC8 479 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 PLIN2Q99541 437 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 CHPF2Q9P2E5 772 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 ESPNB1AK53 854 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 N4BP3O15049 544 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 RARSP54136 660 aaKnown RBP15.73■□□□□ 0.11
LRCH3-206ENST00000438796 NCBP1Q09161 790 aaKnown RBP15.73■□□□□ 0.11
LRCH3-206ENST00000438796 LRRC45Q96CN5 670 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 FAM135AQ9P2D6 1515 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 CTAGE5O15320 804 aa15.73■□□□□ 0.11
LRCH3-206ENST00000438796 MARCKSP29966 332 aaPredicted RBP15.72■□□□□ 0.11
LRCH3-206ENST00000438796 NAA16Q6N069 864 aaPredicted RBP15.72■□□□□ 0.11
LRCH3-206ENST00000438796 SMIM23A6NLE4 172 aa15.72■□□□□ 0.11
LRCH3-206ENST00000438796 WASLO00401 505 aaPredicted RBP15.72■□□□□ 0.11
LRCH3-206ENST00000438796 MIGA1Q8NAN2 632 aa15.72■□□□□ 0.11
LRCH3-206ENST00000438796 HARSP12081 509 aaKnown RBP15.72■□□□□ 0.11
LRCH3-206ENST00000438796 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
LRCH3-206ENST00000438796 PARP3Q9Y6F1 533 aa15.72■□□□□ 0.11
LRCH3-206ENST00000438796 CDK13Q14004 1512 aaKnown RBP15.72■□□□□ 0.11
LRCH3-206ENST00000438796 SAP30BPQ9UHR5 308 aaKnown RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 CABLES1Q8TDN4 633 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 ECHDC1Q9NTX5 307 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 FAM13AO94988 1023 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 ADCY5O95622 1261 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 RTN1Q16799 776 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 ARHGEF11O15085 1522 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 MCM5P33992 734 aa15.71■□□□□ 0.11
LRCH3-206ENST00000438796 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 IQCGQ9H095 443 aaKnown RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 SNRPA1P09661 255 aaKnown RBP15.71■□□□□ 0.11
LRCH3-206ENST00000438796 HELBQ8NG08 1087 aaPredicted RBP15.71■□□□□ 0.1
LRCH3-206ENST00000438796 SYKP43405 635 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 SNW1Q13573 536 aaKnown RBP15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ZNF804AQ7Z570 1209 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 HSF2BPO75031 334 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ANKRD13DQ6ZTN6 518 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ZCRB1Q8TBF4 217 aaKnown RBP15.7■□□□□ 0.1
LRCH3-206ENST00000438796 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ZBTB43O43298 467 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 SPAG5Q96R06 1193 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 POLD1P28340 1107 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ALDH1L2Q3SY69 923 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC102BQ68D86 513 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 GIMAP6Q6P9H5 292 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 SREK1Q8WXA9 508 aaKnown RBP15.7■□□□□ 0.1
LRCH3-206ENST00000438796 NLRP3Q96P20 1036 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 DAPK1P53355 1430 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 GTF2F1P35269 517 aaKnown RBP eCLIP15.7■□□□□ 0.1
LRCH3-206ENST00000438796 PLCB3Q01970 1234 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 ASIC1P78348 528 aa15.7■□□□□ 0.1
LRCH3-206ENST00000438796 AKR1B10O60218 316 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 ODF2LQ9ULJ1 636 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms